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L1_007_000M1_scaffold_2242

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_2242_1
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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27..383
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QSI7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ23947.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
alkaline shock protein
L1_007_000M1_scaffold_2242_2
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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396..2057
DNA (1662bp) protein (554aa)
DAK2 domain fusion protein YloV n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QP17_9FIRM
DAK2 domain fusion protein YloV {ECO:0000313|EMBL:CCZ23946.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
DAK2 domain-containing protein YloV
L1_007_000M1_scaffold_2242_3
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(2105..2920)
DNA (816bp) protein (272aa)
Transcriptional regulator AraC family n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q5B0_9FIRM
Transcriptional regulator AraC family {ECO:0000313|EMBL:CCZ23945.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hypothetical protein
L1_007_000M1_scaffold_2242_4
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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3102..6047
DNA (2946bp) protein (982aa)
Beta-galactosidase {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613}; EC=3.2.1.23 {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613};; Lactase {ECO:0000256|RuleBase:RU361154}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
Beta galactosidase small chain n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QCB7_9FIRM
glycoside hydrolase family protein
L1_007_000M1_scaffold_2242_5
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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6047..6634
DNA (588bp) protein (196aa)
Phosphoglycerate mutase family protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q5X7_9FIRM
Phosphoglycerate mutase family protein {ECO:0000313|EMBL:CCZ23943.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
phosphoglycerate mutase family protein
L1_007_000M1_scaffold_2242_6
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(6672..7451)
DNA (780bp) protein (260aa)
Transcriptional regulator RpiR family n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QSH9_9FIRM
Transcriptional regulator RpiR family {ECO:0000313|EMBL:CCZ23942.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
transcriptional regulator, RpiR family
L1_007_000M1_scaffold_2242_7
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(7498..8085)
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QP12_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ23941.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hypothetical protein
L1_007_000M1_scaffold_2242_8
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(8214..8933)
DNA (720bp) protein (240aa)
Glucosamine-6-phosphate deaminase {ECO:0000256|SAAS:SAAS00029492}; EC=3.5.99.6 {ECO:0000256|SAAS:SAAS00029496};; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
nagB2; glucosamine-6-phosphate isomerases/6-phosphogluconolactonase family protein (EC:3.5.99.6)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q5A5_9FIRM
L1_007_000M1_scaffold_2242_9
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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9174..10544
DNA (1371bp) protein (457aa)
PTS system, lactose/cellobiose family IIC subunit (EC:2.7.1.69)
Putative PTS system cellobiose-specific IIC component n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QCB2_9FIRM
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L1_007_000M1_scaffold_2242_10
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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10658..11152
DNA (495bp) protein (165aa)
Sigma-70 region 4 superfamily n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q5X3_9FIRM
Sigma-70 region 4 superfamily {ECO:0000313|EMBL:CCZ23938.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hypothetical protein
L1_007_000M1_scaffold_2242_11
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

11681..12082
DNA (402bp) protein (134aa)
mRNA interferase {ECO:0000256|PIRNR:PIRNR033490}; EC=3.1.-.- {ECO:0000256|PIRNR:PIRNR033490};; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
mRNA interferase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QSH4_9FIRM
transcriptional modulator of MazE/toxin MazF
L1_007_000M1_scaffold_2242_12
unknown

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12412..12558
DNA (147bp) protein (49aa)

This feature has no annotations

L1_007_000M1_scaffold_2242_13
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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12735..14054
DNA (1320bp) protein (440aa)
Uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C8L4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEC90851.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
hypothetical protein
L1_007_000M1_scaffold_2242_14
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

14100..14384
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C8L4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEC90851.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
hypothetical protein DUF1703
L1_007_000M1_scaffold_2242_15
unknown

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comp(14434..14592)
DNA (159bp) protein (53aa)

This feature has no annotations

Displaying 15 items

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