ggKbase home page

L1_007_000M1_scaffold_1055_15

Organism: dasL1_007_000M1_concoct_56_fa

near complete RP 46 / 55 BSCG 50 / 51 ASCG 13 / 38
Location: 15391..16086

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QRD9_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 99.1
  • Coverage: 231.0
  • Bit_score: 451
  • Evalue 2.80e-124
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.1
  • Coverage: 231.0
  • Bit_score: 451
  • Evalue 4.00e-124
RNA polymerase sigma 70 similarity KEGG
DB: KEGG
  • Identity: 60.6
  • Coverage: 218.0
  • Bit_score: 273
  • Evalue 3.00e-71

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Coprobacillus sp. CAG:235 → Coprobacillus → Erysipelotrichales → Erysipelotrichia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 696
ATGTGGCAAATGATTAGACAGTTTTTAAATACAAAACAGTATCTTTATTATATAGGAAGACATGATATTTTACCGCCTCCTTTAAAAGGTCAACAAGAAAAGGAAATAATTGAAAAAGCAGTTTCTGGGGATCAAAAAGCAAGAGATTTATTGATTGAACATAATTTAAGATTGGTTGTTTATGTTGCTAAAAGATATGACAATAGCGCCAATTGTCCTTTGGAAGATTTAATTAGTATTGGCACAATTGGTTTAGTAAAAGCAATCAAGTCTTTTAAGGCAGATAAAAATATTAAACTTGCGACGTATGCTTCAAGGTGTATTGAAAATGAAATACTTATGTACTTAAGAAAAAATAATAAGATTCGTTATGAGATTTCTTTAGATGAACCTTTAAATATTGATTATGATGGTAATGAGTTATTATTAGGAGATATCGTAGGAACAGATGATGATCTTGTTGAACAAGAGATGTTGAAAAGTGATCAAAAGAAAATTTTTTATGAAGCTTTAAAAGAATTGAATGAAAGAGAAAAAGAAATATTGATTTTAAGATATGGTTTATCTAATAATGATGAATTGACACAAAAGGATGTTGCTGATTTATTAGGTATTTCACAATCCTATATTTCTAGATTAGAAAAAAAGATTATAAAAAAATTAAGAAGTCAATTAAATTATGATGAAGTGAAATAG
PROTEIN sequence
Length: 232
MWQMIRQFLNTKQYLYYIGRHDILPPPLKGQQEKEIIEKAVSGDQKARDLLIEHNLRLVVYVAKRYDNSANCPLEDLISIGTIGLVKAIKSFKADKNIKLATYASRCIENEILMYLRKNNKIRYEISLDEPLNIDYDGNELLLGDIVGTDDDLVEQEMLKSDQKKIFYEALKELNEREKEILILRYGLSNNDELTQKDVADLLGISQSYISRLEKKIIKKLRSQLNYDEVK*