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L1_007_000M1_scaffold_1055

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_1055_1
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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3..719
DNA (717bp) protein (239aa)
Cof-like hydrolase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QMZ1_9FIRM
Cof-like hydrolase {ECO:0000313|EMBL:CCZ23536.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
HAD superfamily hydrolase
L1_007_000M1_scaffold_1055_2
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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825..2642
DNA (1818bp) protein (606aa)
GTP-binding protein TypA/BipA n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q433_9FIRM
GTP-binding protein TypA/BipA {ECO:0000313|EMBL:CCZ23535.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
typA; GTP-binding protein TypA
L1_007_000M1_scaffold_1055_3
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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2768..3580
DNA (813bp) protein (271aa)
TIGR00159 family protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QB90_9FIRM
TIGR00159 family protein {ECO:0000313|EMBL:CCZ23534.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
conserved hypothetical protein TIGR00159
L1_007_000M1_scaffold_1055_4
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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3573..4973
DNA (1401bp) protein (467aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q4X7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ23533.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
YbbR-like domain-containing protein ybbR
L1_007_000M1_scaffold_1055_5
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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4986..6338
DNA (1353bp) protein (451aa)
Phosphoglucosamine mutase {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327}; EC=5.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327};; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
phosphoglucosamine mutase (EC:5.4.2.10)
Phosphoglucosamine mutase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QRE7_9FIRM
L1_007_000M1_scaffold_1055_6
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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6433..7086
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QMY8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ23531.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L1_007_000M1_scaffold_1055_7
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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7086..8393
DNA (1308bp) protein (436aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q428_9FIRM
cssS; OmpR family two component system sensor histidine kinase CssS
L1_007_000M1_scaffold_1055_8
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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8518..9594
DNA (1077bp) protein (359aa)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082867}; EC=2.4.1.227 {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082938};; Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase {ECO:0000256|HAMAP-Rule:MF_00033}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QB85_9FIRM
murG; UDP-N-acetylglucosamine/LPS N-acetylglucosaminetransferase
L1_007_000M1_scaffold_1055_9
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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9594..10511
DNA (918bp) protein (306aa)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-acetylmuramate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00037}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q4X3_9FIRM
murB; UDP-N-acetylenolpyruvoylglucosamine reductase
L1_007_000M1_scaffold_1055_10
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

10513..11265
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QRE3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ23527.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
cell division protein DivIB
L1_007_000M1_scaffold_1055_11
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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11363..12625
DNA (1263bp) protein (421aa)
Cell division protein FtsA n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QMY4_9FIRM
Cell division protein FtsA {ECO:0000313|EMBL:CCZ23526.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
ftsA; cell division protein
L1_007_000M1_scaffold_1055_12
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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12645..13727
DNA (1083bp) protein (361aa)
Cell division protein FtsZ n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q423_9FIRM
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU000631}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
ftsZ; cell division protein FtsZ
L1_007_000M1_scaffold_1055_13
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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13777..14550
DNA (774bp) protein (258aa)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01925};; PCA reductase {ECO:0000256|HAMAP-Rule:MF_01925}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
pyrroline-5-carboxylate reductase (EC:1.5.1.2)
Pyrroline-5-carboxylate reductase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QB82_9FIRM
L1_007_000M1_scaffold_1055_14
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

14654..15391
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q4X0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ23523.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L1_007_000M1_scaffold_1055_15
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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15391..16086
DNA (696bp) protein (232aa)
RNA polymerase sigma factor n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QRD9_9FIRM
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
RNA polymerase sigma 70
L1_007_000M1_scaffold_1055_16
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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16121..16900
DNA (780bp) protein (260aa)
RNA polymerase sigma factor n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QMY3_9FIRM
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
RNA polymerase, sigma subunit, RpsG/SigG
L1_007_000M1_scaffold_1055_17
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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16925..17167
DNA (243bp) protein (81aa)
YlmC/YmxH family sporulation protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q418_9FIRM
YlmC/YmxH family sporulation protein {ECO:0000313|EMBL:CCZ23520.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
YlmC/YmxH family sporulation protein
L1_007_000M1_scaffold_1055_18
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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17246..17686
DNA (441bp) protein (147aa)
Cell division protein SepF n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QB79_9FIRM
Cell division protein SepF {ECO:0000256|HAMAP-Rule:MF_01197}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hypothetical protein
L1_007_000M1_scaffold_1055_19
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

17716..18474
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q4W5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ23518.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
RNA-binding protein S4
L1_007_000M1_scaffold_1055_20
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

18484..18927
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QRD7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ23517.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
divIVA; cell division protein DivIVA
L1_007_000M1_scaffold_1055_21
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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19137..21875
DNA (2739bp) protein (913aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02002}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
isoleucyl-tRNA synthetase (EC:6.1.1.5)
Isoleucine--tRNA ligase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QMY0_9FIRM
L1_007_000M1_scaffold_1055_22
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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21988..22869
DNA (882bp) protein (294aa)
Putative membrane protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q413_9FIRM
Putative membrane protein {ECO:0000313|EMBL:CCZ23515.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hypothetical protein
L1_007_000M1_scaffold_1055_23
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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22866..24137
DNA (1272bp) protein (424aa)
Serine-type D-Ala-D-Ala carboxypeptidase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QB75_9FIRM
Serine-type D-Ala-D-Ala carboxypeptidase {ECO:0000313|EMBL:CCZ23514.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
D-alanyl-D-alanine carboxypeptidase
L1_007_000M1_scaffold_1055_24
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

24247..25032
DNA (786bp) protein (262aa)
Cof protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q4W1_9FIRM
Cof protein {ECO:0000313|EMBL:CCZ23513.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
HAD-superfamily hydrolase, subfamily IIB
L1_007_000M1_scaffold_1055_25
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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25034..25783
DNA (750bp) protein (250aa)
Transcriptional regulator DeoR family n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QRD2_9FIRM
Transcriptional regulator DeoR family {ECO:0000313|EMBL:CCZ23512.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
DeoR family transcriptional regulator
L1_007_000M1_scaffold_1055_26
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(25796..25987)
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QMX4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ23511.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L1_007_000M1_scaffold_1055_27
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

26082..26723
DNA (642bp) protein (214aa)
Phosphoglycolate phosphatase bacterial n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q410_9FIRM
Phosphoglycolate phosphatase bacterial {ECO:0000313|EMBL:CCZ23510.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hypothetical protein
L1_007_000M1_scaffold_1055_28
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

26720..27166
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QB73_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ23509.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hypothetical protein
L1_007_000M1_scaffold_1055_29
Anaerostipes sp. CAG:276, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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27169..27264
DNA (96bp) protein (32aa)
mannose-6-phosphate isomerase, type 1 (EC:5.3.1.8)
Mannose-6-phosphate isomerase n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GC97_9FIRM
Mannose-6-phosphate isomerase {ECO:0000313|EMBL:CDC35566.1}; TaxID=1262699 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes; environmental samples.;" source="Anaerostipes sp. CAG:276.;"
Displaying 29 items

View Taxonomy