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L1_007_000M1_scaffold_7133

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_7133_1
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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84..404
DNA (321bp) protein (107aa)
ABC transporter family protein n=1 Tax=Clostridium difficile Y358 RepID=T4GLM1_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EFV18807.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
ABC transporter-like protein
L1_007_000M1_scaffold_7133_2
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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397..1101
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2NRH6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK40640.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
hypothetical protein
L1_007_000M1_scaffold_7133_3
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1092..1739
DNA (648bp) protein (216aa)
Putative membrane protein n=1 Tax=Clostridium difficile Y358 RepID=T4GRB5_CLODI
Uncharacterized protein {ECO:0000313|EMBL:ERK40641.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
hypothetical protein
L1_007_000M1_scaffold_7133_4
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1774..3078
DNA (1305bp) protein (435aa)
Putative membrane protein n=1 Tax=Clostridium difficile Y358 RepID=T4GRD0_CLODI
Uncharacterized protein {ECO:0000313|EMBL:ERK40642.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
signal transduction histidine kinase-like protein
L1_007_000M1_scaffold_7133_5
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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3059..3658
DNA (600bp) protein (200aa)
Bacterial regulatory s, luxR family protein n=1 Tax=Clostridium difficile Y358 RepID=T4GTZ5_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EFV18811.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
LuxR family two component transcriptional regulator
L1_007_000M1_scaffold_7133_6
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4129..5733)
DNA (1605bp) protein (535aa)
Phosphoenolpyruvate carboxykinase [ATP] {ECO:0000256|HAMAP-Rule:MF_00453}; Short=PCK {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEPCK {ECO:0000256|HAMAP-Rule:MF_00453};; EC=4.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00453};; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
phosphoenolpyruvate carboxykinase (ATP) (EC:4.1.1.49)
Phosphoenolpyruvate carboxykinase [ATP] n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H8V4_9FIRM
L1_007_000M1_scaffold_7133_7
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6637..7698
DNA (1062bp) protein (354aa)
Tryptophan--tRNA ligase {ECO:0000313|EMBL:EEU95807.1}; EC=6.1.1.2 {ECO:0000313|EMBL:EEU95807.1};; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Tryptophan--tRNA ligase n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H8V2_9FIRM
L1_007_000M1_scaffold_7133_8
unknown

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7917..8297
DNA (381bp) protein (127aa)

This feature has no annotations

Displaying 8 items

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