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L1_007_000M1_scaffold_3182

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_3182_1
unknown

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comp(3..71)
-----------------
DNA (69bp)
protein (23aa)

This feature has no annotations

L1_007_000M1_scaffold_3182_2
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(68..334)
-----------------
DNA (267bp)
protein (89aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XCR0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46606.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L1_007_000M1_scaffold_3182_3
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(348..716)
-----------------
DNA (369bp)
protein (123aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XCR1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46607.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L1_007_000M1_scaffold_3182_4
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(676..1320)
-----------------
DNA (645bp)
protein (215aa)
modification methylase MunI (EC:2.1.1.72)
Adenine-specific methyltransferase MunI n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XCR2_9FIRM
Adenine-specific methyltransferase MunI {ECO:0000313|EMBL:EGJ46608.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L1_007_000M1_scaffold_3182_5
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1317..1922)
-----------------
DNA (606bp)
protein (202aa)
Holliday junction resolvase RecU {ECO:0000256|SAAS:SAAS00056687}; EC=3.1.-.- {ECO:0000256|SAAS:SAAS00275393};; EC=3.1.22.- {ECO:0000256|SAAS:SAAS00056689};; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XCR3_9FIRM
prophage LambdaCh01
L1_007_000M1_scaffold_3182_6
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1928..2446)
-----------------
DNA (519bp)
protein (173aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XCR5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46611.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L1_007_000M1_scaffold_3182_7
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2457..3086)
-----------------
DNA (630bp)
protein (210aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XCR6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46612.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
DNA replication protein
L1_007_000M1_scaffold_3182_8
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3337..4188)
-----------------
DNA (852bp)
protein (284aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XCR7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46613.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L1_007_000M1_scaffold_3182_9
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4263..4685)
-----------------
DNA (423bp)
protein (141aa)
Single-stranded DNA-binding protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XCR8_9FIRM
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|RuleBase:RU000524}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
ssb; single-stranded DNA-binding protein
L1_007_000M1_scaffold_3182_10
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4685..5455)
-----------------
DNA (771bp)
protein (257aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XCR9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46615.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
ERF superfamily.
L1_007_000M1_scaffold_3182_11
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5468..6100)
-----------------
DNA (633bp)
protein (211aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XCS0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46616.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L1_007_000M1_scaffold_3182_12
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6090..6239)
-----------------
DNA (150bp)
protein (50aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XCS1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46617.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L1_007_000M1_scaffold_3182_13
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6236..6916)
-----------------
DNA (681bp)
protein (227aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XCS2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46618.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L1_007_000M1_scaffold_3182_14
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6929..7192)
-----------------
DNA (264bp)
protein (88aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XCS3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46619.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L1_007_000M1_scaffold_3182_15
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7197..7907)
-----------------
DNA (711bp)
protein (237aa)
dnaQ; putative DNA polymerase III epsilon subunit (EC:2.7.7.7)
DNA polymerase III subunit epsilon n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XCS4_9FIRM
DNA polymerase III subunit epsilon {ECO:0000313|EMBL:EGJ46620.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L1_007_000M1_scaffold_3182_16
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7900..8604)
-----------------
DNA (705bp)
protein (235aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XCS5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46621.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L1_007_000M1_scaffold_3182_17
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8601..8780)
-----------------
DNA (180bp)
protein (60aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XCS6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46622.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L1_007_000M1_scaffold_3182_18
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8777..9508)
-----------------
DNA (732bp)
protein (244aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XCS7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46623.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Domain of unknown function (DUF955)./Antirestriction protein (ArdA).
L1_007_000M1_scaffold_3182_19
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9496..9882)
-----------------
DNA (387bp)
protein (129aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XCS8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46624.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L1_007_000M1_scaffold_3182_20
unknown

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comp(9887..10093)
-----------------
DNA (207bp)
protein (69aa)

This feature has no annotations

L1_007_000M1_scaffold_3182_21
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10145..10336)
-----------------
DNA (192bp)
protein (64aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VY11_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ37176.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
L1_007_000M1_scaffold_3182_22
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10380..10721)
-----------------
DNA (342bp)
protein (114aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VWQ8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ37175.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
Displaying 22 items

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