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L1_007_000M1_scaffold_3272

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_3272_1
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(141..1931)
-----------------
DNA (1791bp)
protein (597aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
threonyl-tRNA synthetase/Ser-tRNA(Thr) hydrolase (EC:3.1.1.- 6.1.1.3)
Threonine--tRNA ligase n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H8M1_9FIRM
L1_007_000M1_scaffold_3272_2
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2300..3580)
-----------------
DNA (1281bp)
protein (427aa)
Chloride transporter, ClC family n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H8M0_9FIRM
Chloride transporter, ClC family {ECO:0000313|EMBL:EEU95725.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Chloride channel protein EriC
L1_007_000M1_scaffold_3272_3
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3825..5567)
-----------------
DNA (1743bp)
protein (581aa)
Nitrogen regulatory protein P-II n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H8L8_9FIRM
Nitrogen regulatory protein P-II {ECO:0000313|EMBL:EEU95723.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
ammonium transporter
L1_007_000M1_scaffold_3272_4
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5820..6230)
-----------------
DNA (411bp)
protein (137aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H8L7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU95722.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Protein of unknown function (DUF1622).
L1_007_000M1_scaffold_3272_5
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6324..6959)
-----------------
DNA (636bp)
protein (212aa)
Ribose/Galactose Isomerase n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H8L2_9FIRM
Ribose/Galactose Isomerase {ECO:0000313|EMBL:EEU95717.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Ribose 5-phosphate isomerase RpiB
L1_007_000M1_scaffold_3272_6
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7027..7803)
-----------------
DNA (777bp)
protein (259aa)
Oxidoreductase, short chain dehydrogenase/reductase family protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H8L1_9FIRM
Oxidoreductase, short chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:EEU95716.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Short-chain dehydrogenases of various substrate specificities
L1_007_000M1_scaffold_3272_7
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7966..8886
-----------------
DNA (921bp)
protein (307aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H8L0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU95715.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
hypothetical protein
L1_007_000M1_scaffold_3272_8
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9211..9312)
-----------------
DNA (102bp)
protein (34aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H8K9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU95714.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
hypothetical protein
L1_007_000M1_scaffold_3272_9
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9462..11180)
-----------------
DNA (1719bp)
protein (573aa)
Repeat protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H8K8_9FIRM
Repeat protein {ECO:0000313|EMBL:EEU95713.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
hypothetical protein
L1_007_000M1_scaffold_3272_10
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11703..12752)
-----------------
DNA (1050bp)
protein (350aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H8K6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU95711.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Predicted membrane protein
L1_007_000M1_scaffold_3272_11
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12754..13506)
-----------------
DNA (753bp)
protein (251aa)
tRNA (guanine-N(7)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; EC=2.1.1.33 {ECO:0000256|HAMAP-Rule:MF_01057};; tRNA (guanine(46)-N(7))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; tRNA(m7G46)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
tRNA (guanine-N(7)-)-methyltransferase (EC:2.1.1.33)
tRNA (guanine-N(7)-)-methyltransferase n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H8K5_9FIRM
L1_007_000M1_scaffold_3272_12
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13676..14863)
-----------------
DNA (1188bp)
protein (396aa)
Threonine/alanine tRNA ligase second additional domain protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H8K3_9FIRM
Threonine/alanine tRNA ligase second additional domain protein {ECO:0000313|EMBL:EEU95708.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Alanyl-tRNA synthetase
L1_007_000M1_scaffold_3272_13
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14988..16529
-----------------
DNA (1542bp)
protein (514aa)
4-alpha-glucanotransferase {ECO:0000256|RuleBase:RU361207}; EC=2.4.1.25 {ECO:0000256|RuleBase:RU361207};; Amylomaltase {ECO:0000256|RuleBase:RU361207}; Disproportionating enzyme {ECO:0000256|RuleBase:RU361207}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
4-alpha-glucanotransferase (EC:2.4.1.25)
4-alpha-glucanotransferase n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H8K2_9FIRM
L1_007_000M1_scaffold_3272_14
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16593..17519
-----------------
DNA (927bp)
protein (309aa)
Diguanylate cyclase (GGDEF) domain protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H8K1_9FIRM
Diguanylate cyclase (GGDEF) domain protein {ECO:0000313|EMBL:EEU95706.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
FOG: GGDEF domain
L1_007_000M1_scaffold_3272_15
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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17580..18020
-----------------
DNA (441bp)
protein (147aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H8K0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU95705.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
hypothetical protein
L1_007_000M1_scaffold_3272_16
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18028..18735)
-----------------
DNA (708bp)
protein (236aa)
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase {ECO:0000256|SAAS:SAAS00035261}; EC=3.2.2.9 {ECO:0000256|SAAS:SAAS00035196};; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 1 {ECO:0000256|SAAS:SAAS00035231}; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 2 {ECO:0000256|SAAS:SAAS00035188}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase (EC:3.2.2.9)
MTA/SAH nucleosidase n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H8J9_9FIRM
L1_007_000M1_scaffold_3272_17
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18779..19912)
-----------------
DNA (1134bp)
protein (378aa)
Ribosome-binding ATPase YchF n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H8J8_9FIRM
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
GTP-binding protein YchF
L1_007_000M1_scaffold_3272_18
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19990..21168)
-----------------
DNA (1179bp)
protein (393aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R7FY47_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL71571.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein
L1_007_000M1_scaffold_3272_19
Eubacterium sp. CAG:841, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(21301..21933)
-----------------
DNA (633bp)
protein (211aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:841 RepID=R7FY53_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE18642.1}; TaxID=1262894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:841.;"
DNA replication protein
Displaying 19 items

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