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L1_007_000M1_scaffold_1224

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_1224_1
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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348..3371
DNA (3024bp) protein (1008aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7HAU1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU94984.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
ECF subfamily RNA polymerase sigma-24 subunit
L1_007_000M1_scaffold_1224_2
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3535..4428
DNA (894bp) protein (298aa)
D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4)
Serine-type D-Ala-D-Ala carboxypeptidase n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7HAU0_9FIRM
Serine-type D-Ala-D-Ala carboxypeptidase {ECO:0000313|EMBL:EEU94983.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
L1_007_000M1_scaffold_1224_3
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4514..5245
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7HAT9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU94982.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Uncharacterised protein family (UPF0153).
L1_007_000M1_scaffold_1224_4
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5410..6435
DNA (1026bp) protein (342aa)
Tat pathway signal sequence domain protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7HAT8_9FIRM
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:EEU94981.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
ABC-type uncharacterized transport system, periplasmic component
L1_007_000M1_scaffold_1224_5
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6599..7546
DNA (948bp) protein (316aa)
Branched-chain amino acid ABC transporter, permease protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7HAT7_9FIRM
Branched-chain amino acid ABC transporter, permease protein {ECO:0000313|EMBL:EEU94980.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
ABC-type uncharacterized transport system, permease component
L1_007_000M1_scaffold_1224_6
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7539..8333
DNA (795bp) protein (265aa)
ABC transporter, ATP-binding protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7HAT6_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEU94979.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
ABC-type uncharacterized transport system, ATPase component
L1_007_000M1_scaffold_1224_7
Prevotella ruminicola, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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8446..9624
DNA (1179bp) protein (393aa)
Beta-N-acetylhexosaminidase {ECO:0000256|SAAS:SAAS00114579}; EC=3.2.1.52 {ECO:0000256|SAAS:SAAS00114579};; TaxID=264731 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella ruminicola (strain ATCC 19189 / JCM 8958 / 23).;"
Glycosyl hydrolase, family 3 n=1 Tax=Prevotella ruminicola (strain ATCC 19189 / JCM 8958 / 23) RepID=D5EYH0_PRER2
family 3 glycosyl hydrolase
L1_007_000M1_scaffold_1224_8
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9696..10784)
DNA (1089bp) protein (363aa)
Sugar kinases, ribokinase family (EC:2.7.1.45)
Kinase, PfkB family n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7HAT4_9FIRM
Kinase, PfkB family {ECO:0000313|EMBL:EEU94977.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
L1_007_000M1_scaffold_1224_9
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11063..11983)
DNA (921bp) protein (307aa)
Uncharacterized Fe-S protein PflX, homolog of pyruvate formate lyase activating proteins (EC:1.97.1.4)
Uncharacterized Fe-S protein PflX homolog of pyruvate formate lyase activating proteins n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6QCD7_9FIRM
Uncharacterized Fe-S protein PflX homolog of pyruvate formate lyase activating proteins {ECO:0000313|EMBL:CDC30749.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
L1_007_000M1_scaffold_1224_10
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12118..14124
DNA (2007bp) protein (669aa)
Fructose-1,6-bisphosphatase class 3 {ECO:0000256|HAMAP-Rule:MF_01854}; Short=FBPase class 3 {ECO:0000256|HAMAP-Rule:MF_01854};; EC=3.1.3.11 {ECO:0000256|HAMAP-Rule:MF_01854};; D-fructose-1,6-bisphosphate 1-phosphohydrolase class 3 {ECO:0000256|HAMAP-Rule:MF_01854}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
hypothetical protein (EC:3.1.3.11)
Firmicute fructose-1,6-bisphosphatase n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7HAT1_9FIRM
L1_007_000M1_scaffold_1224_11
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14270..15646
DNA (1377bp) protein (459aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylpyruvate transferase {ECO:0000256|HAMAP-Rule:MF_00111}; UDP-N-acetylglucosamine enolpyruvyl transferase {ECO:0000256|HAMAP-Rule:MF_00111}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
murA3; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 3 (EC:2.5.1.7)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7HAT0_9FIRM
L1_007_000M1_scaffold_1224_12
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15741..16529
DNA (789bp) protein (263aa)
Metallo-beta-lactamase domain protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7HAS9_9FIRM
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:EEU95004.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Metal-dependent hydrolases of the beta-lactamase superfamily I
L1_007_000M1_scaffold_1224_13
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16592..17272)
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7HAS8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU95003.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Domain of unknown function (DUF1836).
L1_007_000M1_scaffold_1224_14
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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17303..18142
DNA (840bp) protein (280aa)
EDD domain protein, DegV family n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7HAS7_9FIRM
EDD domain protein, DegV family {ECO:0000313|EMBL:EEU95002.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
EDD domain protein, DegV family
L1_007_000M1_scaffold_1224_15
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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18296..19825
DNA (1530bp) protein (510aa)
Phospholipase D domain protein {ECO:0000313|EMBL:EEU95001.1}; EC=3.1.-.- {ECO:0000313|EMBL:EEU95001.1};; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes (EC:2.7.8.-)
Phospholipase D domain protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7HAS6_9FIRM
L1_007_000M1_scaffold_1224_16
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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20064..21044
DNA (981bp) protein (327aa)
Uncharacterized protein n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6PT52_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC27548.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
hypothetical protein
L1_007_000M1_scaffold_1224_17
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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21350..22186
DNA (837bp) protein (279aa)
ABC transporter, substrate-binding protein, family 3 n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7HAI1_9FIRM
ABC transporter, substrate-binding protein, family 3 {ECO:0000313|EMBL:EEU95044.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-)
L1_007_000M1_scaffold_1224_18
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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22347..23000
DNA (654bp) protein (218aa)
ABC transporter, permease protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7HAQ9_9FIRM
ABC transporter, permease protein {ECO:0000313|EMBL:EEU95043.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
polar amino acid ABC transporter inner membrane subunit
L1_007_000M1_scaffold_1224_19
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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23016..23798
DNA (783bp) protein (261aa)
amino acid ABC transporter ATP-binding protein, PAAT family (TC 3.A.1.3.-) (EC:3.6.3.-)
ABC transporter, ATP-binding protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7HAQ8_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEU95042.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
L1_007_000M1_scaffold_1224_20
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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24051..24401
DNA (351bp) protein (117aa)
Uncharacterized protein n=2 Tax=Ruminococcaceae RepID=E2ZHR2_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EGJ45393.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Displaying 20 items

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