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L1_007_000M1_scaffold_33

Search features with annotation key words

Displaying items 1-30 of 166 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_33_1
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

230..673
-----------------
DNA (444bp)
protein (148aa)
Cytidine deaminase homotetrameric n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6PZW2_9FIRM
Cytidine deaminase homotetrameric {ECO:0000313|EMBL:CDC29075.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
cytidine deaminase, homotetrameric
L1_007_000M1_scaffold_33_2
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

687..1136
-----------------
DNA (450bp)
protein (150aa)
Cytidine deaminase {ECO:0000313|EMBL:EEU97273.1}; EC=3.5.4.5 {ECO:0000313|EMBL:EEU97273.1};; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Cytidine deaminase n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H3U1_9FIRM
cytidine deaminase, homotetrameric
L1_007_000M1_scaffold_33_3
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1339..2514
-----------------
DNA (1176bp)
protein (392aa)
Basic membrane protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H3U0_9FIRM
Basic membrane protein {ECO:0000313|EMBL:EEU97272.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein
L1_007_000M1_scaffold_33_4
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2752..4284
-----------------
DNA (1533bp)
protein (511aa)
Putative phage tail component domain protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H3T8_9FIRM
Putative phage tail component domain protein {ECO:0000313|EMBL:EEU97270.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
ABC transporter
L1_007_000M1_scaffold_33_5
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4291..5460
-----------------
DNA (1170bp)
protein (390aa)
Branched-chain amino acid ABC transporter, permease protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H3T7_9FIRM
Branched-chain amino acid ABC transporter, permease protein {ECO:0000313|EMBL:EEU97269.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
nucleoside ABC transporter membrane protein
L1_007_000M1_scaffold_33_6
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5462..6379
-----------------
DNA (918bp)
protein (306aa)
Branched-chain amino acid ABC transporter, permease protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H3T6_9FIRM
Branched-chain amino acid ABC transporter, permease protein {ECO:0000313|EMBL:EEU97268.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
nucleoside ABC transporter membrane protein
L1_007_000M1_scaffold_33_7
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6535..7854
-----------------
DNA (1320bp)
protein (440aa)
Pyrimidine-nucleoside phosphorylase {ECO:0000313|EMBL:EEU97266.1}; EC=2.4.2.2 {ECO:0000313|EMBL:EEU97266.1};; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
thymidine phosphorylase (EC:2.4.2.2 2.4.2.4)
Pyrimidine-nucleoside phosphorylase n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H3T4_9FIRM
L1_007_000M1_scaffold_33_8
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7902..9260
-----------------
DNA (1359bp)
protein (453aa)
Potassium transporter peripheral membrane component n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H3T3_9FIRM
Potassium transporter peripheral membrane component {ECO:0000313|EMBL:EEU97265.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
K+ transport systems, NAD-binding component
L1_007_000M1_scaffold_33_9
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9273..10715
-----------------
DNA (1443bp)
protein (481aa)
Cation transport protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H3T2_9FIRM
Cation transport protein {ECO:0000313|EMBL:EEU97264.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Trk-type K+ transport systems, membrane components
L1_007_000M1_scaffold_33_10
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10770..11981)
-----------------
DNA (1212bp)
protein (404aa)
Transporter, major facilitator family protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H3T1_9FIRM
Transporter, major facilitator family protein {ECO:0000313|EMBL:EEU97263.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Major Facilitator Superfamily.
L1_007_000M1_scaffold_33_11
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12831..13853
-----------------
DNA (1023bp)
protein (341aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
phenylalanyl-tRNA synthetase, alpha subunit (EC:6.1.1.20)
Phenylalanine--tRNA ligase alpha subunit n=2 Tax=Faecalibacterium RepID=C7H3S8_9FIRM
L1_007_000M1_scaffold_33_12
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13872..16283
-----------------
DNA (2412bp)
protein (804aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H3S7_9FIRM
L1_007_000M1_scaffold_33_13
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16287..16787
-----------------
DNA (501bp)
protein (167aa)
6-O-methylguanine DNA methyltransferase, DNA binding domain protein {ECO:0000313|EMBL:EEU97510.1}; EC=2.1.1.63 {ECO:0000313|EMBL:EEU97510.1};; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
O-6-methylguanine DNA methyltransferase (EC:2.1.1.63)
6-O-methylguanine DNA methyltransferase, DNA binding domain protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H3S6_9FIRM
L1_007_000M1_scaffold_33_14
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17263..17745)
-----------------
DNA (483bp)
protein (161aa)
SsrA-binding protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H3S5_9FIRM
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
SsrA-binding protein
L1_007_000M1_scaffold_33_15
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17857..18351)
-----------------
DNA (495bp)
protein (165aa)
Sortase and related acyltransferases (EC:2.3.1.-)
Acetyltransferase, GNAT family n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H3S4_9FIRM
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EEU97508.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
L1_007_000M1_scaffold_33_16
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18702..19775
-----------------
DNA (1074bp)
protein (358aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H3S2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU97506.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Esterase/lipase
L1_007_000M1_scaffold_33_17
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19794..21275
-----------------
DNA (1482bp)
protein (494aa)
Transglutaminase-like protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H3S1_9FIRM
Transglutaminase-like protein {ECO:0000313|EMBL:EEU97505.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Transglutaminase-like enzymes, putative cysteine proteases
L1_007_000M1_scaffold_33_18
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21279..22610
-----------------
DNA (1332bp)
protein (444aa)
RmuC domain protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H3S0_9FIRM
RmuC domain protein {ECO:0000313|EMBL:EEU97504.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
hypothetical protein
L1_007_000M1_scaffold_33_19
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22700..23881
-----------------
DNA (1182bp)
protein (394aa)
Metallo-beta-lactamase domain protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H3R9_9FIRM
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:EEU97503.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Uncharacterized flavoproteins
L1_007_000M1_scaffold_33_20
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24034..24411)
-----------------
DNA (378bp)
protein (126aa)
PAS domain S-box protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H3R8_9FIRM
PAS domain S-box protein {ECO:0000313|EMBL:EEU97502.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
hypothetical protein
L1_007_000M1_scaffold_33_21
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24399..25409)
-----------------
DNA (1011bp)
protein (337aa)
Pseudouridine synthase, RluA family {ECO:0000313|EMBL:EEU97501.1}; EC=5.4.99.- {ECO:0000313|EMBL:EEU97501.1};; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Pseudouridylate synthases, 23S RNA-specific (EC:5.4.99.12)
Pseudouridine synthase, RluA family n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H3R7_9FIRM
L1_007_000M1_scaffold_33_22
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25662..26387
-----------------
DNA (726bp)
protein (242aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H3R5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU97500.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
DNA repair protein radc
L1_007_000M1_scaffold_33_23
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26472..28529
-----------------
DNA (2058bp)
protein (686aa)
UvrABC system protein B n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H3R4_9FIRM
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_00204}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Excinuclease ABC subunit B
L1_007_000M1_scaffold_33_24
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28516..31398
-----------------
DNA (2883bp)
protein (961aa)
UvrABC system protein A n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H3R3_9FIRM
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_00205}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
uvrA; UvrABC system protein A
L1_007_000M1_scaffold_33_25
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31577..33127)
-----------------
DNA (1551bp)
protein (517aa)
Resolvase, N-terminal domain protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZMX6_9FIRM
Resolvase, N-terminal domain protein {ECO:0000313|EMBL:EFQ05432.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Site-specific recombinases, DNA invertase Pin homologs
L1_007_000M1_scaffold_33_26
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33368..33631
-----------------
DNA (264bp)
protein (88aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K6A7E0_9PORP
Putative toxin-antitoxin system, toxin component, HicA family {ECO:0000313|EMBL:EFK61701.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
hypothetical protein
L1_007_000M1_scaffold_33_27
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33628..34113
-----------------
DNA (486bp)
protein (162aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CCZ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO33567.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
HicB protein
L1_007_000M1_scaffold_33_28
unknown

Not on your lists

34107..34526
-----------------
DNA (420bp)
protein (140aa)

This feature has no annotations

L1_007_000M1_scaffold_33_29
unknown

Not on your lists

comp(34576..35199)
-----------------
DNA (624bp)
protein (208aa)

This feature has no annotations

L1_007_000M1_scaffold_33_30
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35384..35809)
-----------------
DNA (426bp)
protein (142aa)
DNA-binding helix-turn-helix protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZI88_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EFQ07074.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Predicted transcriptional regulators
Displaying items 1-30 of 166 in total

View Taxonomy