ggKbase home page

L1_007_000M1_scaffold_137

Search features with annotation key words

Displaying items 1-30 of 83 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_137_1
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

549..2600
DNA (2052bp) protein (684aa)
Repeat protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H8K8_9FIRM
Repeat protein {ECO:0000313|EMBL:EEU95713.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
S-layer domain-containing protein
L1_007_000M1_scaffold_137_2
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2807..6166
DNA (3360bp) protein (1120aa)
SNF2 family N-terminal domain protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H341_9FIRM
SNF2 family N-terminal domain protein {ECO:0000313|EMBL:EEU97775.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Superfamily II DNA/RNA helicases, SNF2 family
L1_007_000M1_scaffold_137_3
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6163..7161
DNA (999bp) protein (333aa)
NlpC/P60 family protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H340_9FIRM
NlpC/P60 family protein {ECO:0000313|EMBL:EEU97774.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Cell wall-associated hydrolases (invasion-associated proteins)
L1_007_000M1_scaffold_137_4
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7341..8339
DNA (999bp) protein (333aa)
Zn-dependent dipeptidase, microsomal dipeptidase homolog (EC:3.4.13.19)
Renal dipeptidase family protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H339_9FIRM
Renal dipeptidase family protein {ECO:0000313|EMBL:EEU97773.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
L1_007_000M1_scaffold_137_5
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8502..9353
DNA (852bp) protein (284aa)
Beta-lactamase class A (EC:3.5.2.6)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H338_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU97772.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
L1_007_000M1_scaffold_137_6
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9379..10152
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H337_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU97771.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Predicted permeases
L1_007_000M1_scaffold_137_7
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10209..11063)
DNA (855bp) protein (285aa)
EDD domain protein, DegV family n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H334_9FIRM
EDD domain protein, DegV family {ECO:0000313|EMBL:EEU97768.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
EDD domain protein, DegV family
L1_007_000M1_scaffold_137_8
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11265..11732
DNA (468bp) protein (156aa)
CAAX amino terminal protease family protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H333_9FIRM
CAAX amino terminal protease family protein {ECO:0000313|EMBL:EEU97767.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
CAAX amino terminal protease family.
L1_007_000M1_scaffold_137_9
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11729..12217
DNA (489bp) protein (163aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
tRNA-adenosine deaminase (EC:3.5.4.-)
Cytidine and deoxycytidylate deaminase zinc-binding region n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H332_9FIRM
L1_007_000M1_scaffold_137_10
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12464..13321
DNA (858bp) protein (286aa)
Oxidoreductase, short chain dehydrogenase/reductase family protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H330_9FIRM
Oxidoreductase, short chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:EEU97764.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
short-chain dehydrogenase/reductase SDR
L1_007_000M1_scaffold_137_11
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13401..14786
DNA (1386bp) protein (462aa)
RNA polymerase sigma factor SigA n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H329_9FIRM
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
RNA polymerase sigma factor, sigma-70 family
L1_007_000M1_scaffold_137_12
Acidiphilium sp. CAG:727, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14860..16179)
DNA (1320bp) protein (440aa)
ATP/GTP-binding protein n=1 Tax=Clostridiales bacterium NK3B98 RepID=UPI0003B6F6AE
Possible ATPase {ECO:0000313|EMBL:CDE21794.1}; TaxID=1262689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium; environmental samples.;" source="Acidiphilium sp. CAG:727.;"
ATP/GTP-binding protein
L1_007_000M1_scaffold_137_13
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16414..17082
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H328_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU97762.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
hypothetical protein
L1_007_000M1_scaffold_137_14
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17278..17535
DNA (258bp) protein (86aa)
Phosphocarrier, HPr family n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H326_9FIRM
Phosphocarrier, HPr family {ECO:0000313|EMBL:EEU97761.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Phosphotransferase System HPr (HPr) Family
L1_007_000M1_scaffold_137_15
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17620..19266
DNA (1647bp) protein (549aa)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000256|PIRNR:PIRNR000732}; EC=2.7.3.9 {ECO:0000256|PIRNR:PIRNR000732};; Phosphotransferase system, enzyme I {ECO:0000256|PIRNR:PIRNR000732}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
phosphoenolpyruvate--protein phosphotransferase (EC:2.7.3.9)
Phosphoenolpyruvate-protein phosphotransferase n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H325_9FIRM
L1_007_000M1_scaffold_137_16
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19498..20685
DNA (1188bp) protein (396aa)
Cation diffusion facilitator family transporter n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H324_9FIRM
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:EEU97758.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
cation diffusion facilitator family transporter
L1_007_000M1_scaffold_137_17
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20713..21897
DNA (1185bp) protein (395aa)
Aminotransferase, class I/II {ECO:0000313|EMBL:EEU97757.1}; EC=2.6.1.- {ECO:0000313|EMBL:EEU97757.1};; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Aspartate/tyrosine/aromatic aminotransferase (EC:2.6.1.1)
Aminotransferase, class I/II n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H323_9FIRM
L1_007_000M1_scaffold_137_18
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21978..23189
DNA (1212bp) protein (404aa)
Isocitrate dehydrogenase [NADP] {ECO:0000256|PIRNR:PIRNR000108}; EC=1.1.1.42 {ECO:0000256|PIRNR:PIRNR000108};; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
isocitrate dehydrogenase, NADP-dependent, eukaryotic type (EC:1.1.1.42)
Isocitrate dehydrogenase [NADP] n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H322_9FIRM
L1_007_000M1_scaffold_137_19
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23298..25073
DNA (1776bp) protein (592aa)
Beta-galactosidase/beta-glucuronidase n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KAB4_9FIRM
Beta-galactosidase/beta-glucuronidase {ECO:0000313|EMBL:CBL01777.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
Beta-galactosidase/beta-glucuronidase
L1_007_000M1_scaffold_137_20
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25254..26390)
DNA (1137bp) protein (379aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H319_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU97753.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
hypothetical protein
L1_007_000M1_scaffold_137_21
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26566..30027)
DNA (3462bp) protein (1154aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
transcription-repair coupling factor (EC:3.6.1.-)
Transcription-repair-coupling factor n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H318_9FIRM
L1_007_000M1_scaffold_137_22
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30202..30975)
DNA (774bp) protein (258aa)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673};; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H317_9FIRM
L1_007_000M1_scaffold_137_23
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31039..31176)
DNA (138bp) protein (46aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H316_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU97750.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
L1_007_000M1_scaffold_137_24
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31459..32214)
DNA (756bp) protein (252aa)
Bacterial transferase hexapeptide repeat protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H314_9FIRM
Bacterial transferase hexapeptide repeat protein {ECO:0000313|EMBL:EEU97748.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
hypothetical protein
L1_007_000M1_scaffold_137_25
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32592..35258
DNA (2667bp) protein (889aa)
Pyruvate, phosphate dikinase {ECO:0000313|EMBL:EEU97746.1}; EC=2.7.9.1 {ECO:0000313|EMBL:EEU97746.1};; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
pyruvate phosphate dikinase (EC:2.7.9.1)
Pyruvate, phosphate dikinase n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H312_9FIRM
L1_007_000M1_scaffold_137_26
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35503..37086
DNA (1584bp) protein (528aa)
Peptidase, C69 family n=3 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H311_9FIRM
Peptidase, C69 family {ECO:0000313|EMBL:EEU97745.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Dipeptidase
L1_007_000M1_scaffold_137_27
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37779..40544
DNA (2766bp) protein (922aa)
CRISPR-associated helicase Cas3 n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KAG0_9FIRM
CRISPR-associated helicase Cas3
CRISPR-associated helicase Cas3 {ECO:0000313|EMBL:CBL01823.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L1_007_000M1_scaffold_137_28
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

40531..42174
DNA (1644bp) protein (548aa)
CRISPR-associated protein, Cse1 family n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KAG1_9FIRM
CRISPR-associated protein, Cse1 family
CRISPR-associated protein, Cse1 family {ECO:0000313|EMBL:CBL01824.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L1_007_000M1_scaffold_137_29
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

42171..42794
DNA (624bp) protein (208aa)
CRISPR-associated protein Cse2 family n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6PW52_9FIRM
CRISPR-associated protein Cse2 family {ECO:0000313|EMBL:CDC28628.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
CRISPR-associated protein, Cse2 family
L1_007_000M1_scaffold_137_30
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

42796..43875
DNA (1080bp) protein (360aa)
CRISPR-associated protein Cse4 family n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6PYI3_9FIRM
CRISPR-associated protein Cse4 family {ECO:0000313|EMBL:CDC28630.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
CRISPR-associated protein, Cse4 family
Displaying items 1-30 of 83 in total

View Taxonomy