ggKbase home page

L1_007_000M1_scaffold_2048

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_2048_1
unknown

Not on your lists

comp(2..148)
DNA (147bp) protein (49aa)

This feature has no annotations

L1_007_000M1_scaffold_2048_2
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

271..366
DNA (96bp) protein (32aa)
Uncharacterized protein (Fragment) n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZNB6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ05320.1}; Flags: Fragment;; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
L1_007_000M1_scaffold_2048_3
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

363..1220
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZNB7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ05321.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
hypothetical protein
L1_007_000M1_scaffold_2048_4
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1284..2318
DNA (1035bp) protein (345aa)
Threonine dehydrogenase and related Zn-dependent dehydrogenases (EC:1.1.1.1)
GroES-like protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H582_9FIRM
GroES-like protein {ECO:0000313|EMBL:EEU97000.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
L1_007_000M1_scaffold_2048_5
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2491..4230
DNA (1740bp) protein (580aa)
Adenine deaminase {ECO:0000256|HAMAP-Rule:MF_01518, ECO:0000256|SAAS:SAAS00006067}; Short=Adenase {ECO:0000256|HAMAP-Rule:MF_01518};; Short=Adenine aminase {ECO:0000256|HAMAP-Rule:MF_01518};; EC=3.5.4.2 {ECO:0000256|HAMAP-Rule:MF_01518, ECO:0000256|SAAS:SAAS00006067};; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Adenine deaminase (EC:3.5.4.2)
Adenine deaminase n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZNB9_9FIRM
L1_007_000M1_scaffold_2048_6
Faecalitalea cylindroides, Faecalitalea, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

4384..4662
DNA (279bp) protein (93aa)
Uncharacterized protein n=6 Tax=Firmicutes RepID=U2PPC7_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERK45956.1}; TaxID=649755 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Faecalitalea.;" source="Faecalitalea cylindroides ATCC 27803.;"
L1_007_000M1_scaffold_2048_7
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4730..5221
DNA (492bp) protein (164aa)
HD domain protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H586_9FIRM
HD domain protein {ECO:0000313|EMBL:EEU96922.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
HD domain.
L1_007_000M1_scaffold_2048_8
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5224..5736
DNA (513bp) protein (171aa)
NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding (EC:3.6.1.22)
Hydrolase, NUDIX family n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S8T6_9FIRM
Hydrolase, NUDIX family {ECO:0000313|EMBL:EDP22418.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
L1_007_000M1_scaffold_2048_9
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5875..7068
DNA (1194bp) protein (398aa)
Uncharacterized conserved protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K3G8_9FIRM
hypothetical protein
Uncharacterized conserved protein {ECO:0000313|EMBL:CBK98061.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L1_007_000M1_scaffold_2048_10
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7594..7830
DNA (237bp) protein (79aa)
Uncharacterized protein n=4 Tax=Faecalibacterium prausnitzii RepID=A8S8S1_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL01095.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L1_007_000M1_scaffold_2048_11
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8163..9239
DNA (1077bp) protein (359aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K8D3_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDP22401.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
L1_007_000M1_scaffold_2048_12
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9678..10034
DNA (357bp) protein (119aa)
Sigma-70, region 4 n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H7I9_9FIRM
Sigma-70, region 4 {ECO:0000313|EMBL:EEU96132.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
putative RNA polymerase sigma factor
L1_007_000M1_scaffold_2048_13
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10098..10898)
DNA (801bp) protein (267aa)
Short-chain dehydrogenases of various substrate specificities n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K8H1_9FIRM
Short-chain dehydrogenases of various substrate specificities
Short-chain dehydrogenases of various substrate specificities {ECO:0000313|EMBL:CBL01134.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L1_007_000M1_scaffold_2048_14
Bifidobacterium reuteri, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11110..12342)
DNA (1233bp) protein (411aa)
Transporter major facilitator family protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QTJ6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KFI84947.1}; TaxID=1437610 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium reuteri DSM 23975.;"
major facilitator superfamily transporter
L1_007_000M1_scaffold_2048_15
Bifidobacterium reuteri, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12355..13131)
DNA (777bp) protein (259aa)
Short-chain dehydrogenase {ECO:0000313|EMBL:KFI84946.1}; EC=1.1.1.- {ECO:0000313|EMBL:KFI84946.1};; TaxID=1437610 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium reuteri DSM 23975.;"
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J1H9_9CLOT
hypothetical protein
L1_007_000M1_scaffold_2048_16
Ruminococcus sp. CAG:579, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13280..14164
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:579 RepID=R6CAQ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA73678.1}; TaxID=1262963 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:579.;"
LysR family transcriptional regulator
L1_007_000M1_scaffold_2048_17
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14502..15956
DNA (1455bp) protein (485aa)
ImpB/MucB/SamB family protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H7H9_9FIRM
ImpB/MucB/SamB family protein {ECO:0000313|EMBL:EEU96123.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Nucleotidyltransferase/DNA polymerase involved in DNA repair
L1_007_000M1_scaffold_2048_18
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15937..16434
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZGK1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ07687.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
YolD-like protein.
L1_007_000M1_scaffold_2048_19
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16533..16748
DNA (216bp) protein (72aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K8E1_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL01104.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L1_007_000M1_scaffold_2048_20
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16866..17591
DNA (726bp) protein (242aa)
Transcriptional regulator, MerR family n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K3E3_9FIRM
transcriptional regulator, MerR family
Transcriptional regulator, MerR family {ECO:0000313|EMBL:CBK98036.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L1_007_000M1_scaffold_2048_21
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17841..18083
DNA (243bp) protein (81aa)
Macro domain protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZNA2_9FIRM
Macro domain protein {ECO:0000313|EMBL:EFQ05336.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1
L1_007_000M1_scaffold_2048_22
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18123..18284
DNA (162bp) protein (54aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 9_1_43BFAA RepID=F3AL82_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCY31227.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
Displaying 22 items

View Taxonomy