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L1_007_000M1_scaffold_5492

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_5492_1
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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116..328
DNA (213bp) protein (71aa)
Helix-turn-helix n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXZ2_9FIRM
Helix-turn-helix.
Helix-turn-helix {ECO:0000313|EMBL:CBK98891.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L1_007_000M1_scaffold_5492_2
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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312..977
DNA (666bp) protein (222aa)
Sigma-70 region 2 n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S8W6_9FIRM
Sigma-70 region 2 {ECO:0000313|EMBL:EDP22271.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
RNA polymerase sigma factor, sigma-70 family
L1_007_000M1_scaffold_5492_3
Desulfotomaculum gibsoniae, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1149..1583)
DNA (435bp) protein (145aa)
DNA-directed RNA polymerase specialized sigma subunit, sigma24 n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KKX8_9FIRM
DNA-directed RNA polymerase specialized sigma subunit, sigma24
DNA-directed RNA polymerase specialized sigma subunit, sigma24 {ECO:0000313|EMBL:AGL03314.1}; TaxID=767817 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum gibsoniae DSM 7213.;"
L1_007_000M1_scaffold_5492_4
unknown

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1733..2509
DNA (777bp) protein (259aa)

This feature has no annotations

L1_007_000M1_scaffold_5492_5
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2655..3560)
DNA (906bp) protein (302aa)
Lysozyme {ECO:0000256|RuleBase:RU003788}; EC=3.2.1.17 {ECO:0000256|RuleBase:RU003788};; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
Phage-like lysozyme n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MVX1_CLOSA
hypothetical protein
L1_007_000M1_scaffold_5492_6
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3716..4000
DNA (285bp) protein (95aa)
Transcriptional regulator TetR family n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5U0J2_9CLOT
Transcriptional regulator TetR family {ECO:0000313|EMBL:CCZ62647.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
L1_007_000M1_scaffold_5492_7
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4156..4428
DNA (273bp) protein (91aa)
Addiction module antitoxin, RelB/DinJ family n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SDI6_9FIRM
Addiction module antitoxin, RelB/DinJ family {ECO:0000313|EMBL:EDP20907.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
addiction module antitoxin, RelB/DinJ family
L1_007_000M1_scaffold_5492_8
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4445..5086
DNA (642bp) protein (214aa)
Site-specific recombinases, DNA invertase Pin homologs n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KAL2_9FIRM
Site-specific recombinases, DNA invertase Pin homologs
Site-specific recombinases, DNA invertase Pin homologs {ECO:0000313|EMBL:CBL02259.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L1_007_000M1_scaffold_5492_9
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5234..6247
DNA (1014bp) protein (338aa)
Resolvase, N-terminal domain protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZIW2_9FIRM
Resolvase, N-terminal domain protein {ECO:0000313|EMBL:EFQ07011.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Site-specific recombinases, DNA invertase Pin homologs
L1_007_000M1_scaffold_5492_10
Desulfitobacterium hafniense, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6760..7539)
DNA (780bp) protein (260aa)
DNA polymerase n=1 Tax=Clostridium sp. BL8 RepID=T0PEN2_9CLOT
DNA polymerase, beta-like region {ECO:0000313|EMBL:CDX01150.1}; TaxID=49338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium hafniense (Desulfitobacterium frappieri).;"
putative nucleotidyltransferase
Displaying 10 items

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