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L1_007_000M1_scaffold_3433

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_3433_1
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..220
DNA (219bp) protein (73aa)
Beta-galactosidase/beta-glucuronidase (EC:3.2.1.23)
Beta-galactosidase/beta-glucuronidase {ECO:0000313|EMBL:CBK94938.1}; EC=3.2.1.23 {ECO:0000313|EMBL:CBK94938.1};; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
Beta-galactosidase/beta-glucuronidase n=1 Tax=Eubacterium rectale M104/1 RepID=D4JPB9_9FIRM
L1_007_000M1_scaffold_3433_2
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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204..1151
DNA (948bp) protein (316aa)
Beta-galactosidase {ECO:0000256|SAAS:SAAS00046613}; EC=3.2.1.23 {ECO:0000256|SAAS:SAAS00046613};; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
Beta galactosidase small chain. (EC:3.2.1.23)
Beta-galactosidase small subunit (Lactase small subunit) n=1 Tax=Eubacterium rectale CAG:36 RepID=R6U496_9FIRM
L1_007_000M1_scaffold_3433_3
unknown

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1198..1302
DNA (105bp) protein (35aa)

This feature has no annotations

L1_007_000M1_scaffold_3433_4
Roseburia sp. CAG:100, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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1324..2241
DNA (918bp) protein (306aa)
AraC family transcriptional regulator n=1 Tax=Butyrivibrio sp. AD3002 RepID=UPI0003B6CC0F
L-rhamnose operon transcriptional activator {ECO:0000313|EMBL:CDF46046.1}; TaxID=1262940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:100.;"
AraC-type DNA-binding domain-containing proteins
L1_007_000M1_scaffold_3433_5
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2609..3916
DNA (1308bp) protein (436aa)
Lactose-binding protein n=2 Tax=Clostridiales RepID=B0NFW2_CLOSV
Lactose-binding protein {ECO:0000313|EMBL:EDS06506.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-)
L1_007_000M1_scaffold_3433_6
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4002..4892
DNA (891bp) protein (297aa)
ABC transporter, permease protein n=2 Tax=Clostridiales RepID=B0NFW1_CLOSV
ABC transporter, permease protein {ECO:0000313|EMBL:EDS06505.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
lactose transport system (permease)
L1_007_000M1_scaffold_3433_7
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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4885..5694
DNA (810bp) protein (270aa)
ABC transporter, permease protein n=2 Tax=Clostridiales RepID=B0NFW0_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN39382.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-)
L1_007_000M1_scaffold_3433_8
Firmicutes bacterium CAG:227, Firmicutes, Bacteria

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5714..8752
DNA (3039bp) protein (1013aa)
Beta-galactosidase {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613}; EC=3.2.1.23 {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613};; Lactase {ECO:0000256|RuleBase:RU361154}; TaxID=1263010 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:227.;"
Beta-galactosidase/beta-glucuronidase (EC:3.2.1.23)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:227 RepID=R6WAV3_9FIRM
L1_007_000M1_scaffold_3433_9
Butyrivibrio sp. CAG:318, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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8755..8985
DNA (231bp) protein (77aa)
Transcriptional regulator n=1 Tax=Butyrivibrio sp. CAG:318 RepID=R6QKQ8_9FIRM
Transcriptional regulator {ECO:0000313|EMBL:CDC36375.1}; TaxID=1262761 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio; environmental samples.;" source="Butyrivibrio sp. CAG:318.;"
alanine racemase
L1_007_000M1_scaffold_3433_10
Coprococcus eutactus CAG:665, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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9018..9752
DNA (735bp) protein (245aa)
Transcriptional regulator, LacI family n=2 Tax=Coprococcus RepID=A8SPU3_9FIRM
Transcriptional regulator LacI family {ECO:0000313|EMBL:CCZ93207.1}; TaxID=1263071 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus eutactus CAG:665.;"
LacI family transcriptional regulator
Displaying 10 items

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