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L1_007_000M1_scaffold_1134

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_1134_1
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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225..2213
DNA (1989bp) protein (663aa)
Beta-galactosidase (EC:3.2.1.23)
Beta-galactosidase n=1 Tax=Eubacterium rectale CAG:36 RepID=R6TX72_9FIRM
Beta-galactosidase {ECO:0000313|EMBL:CDC74434.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
L1_007_000M1_scaffold_1134_2
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2385..3083
DNA (699bp) protein (233aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4Z857_EUBR3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR75074.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L1_007_000M1_scaffold_1134_3
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3201..4151)
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=Eubacterium rectale CAG:36 RepID=R6U2W4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC74436.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
hypothetical protein
L1_007_000M1_scaffold_1134_4
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4194..5954)
DNA (1761bp) protein (587aa)
Exonuclease RecJ n=1 Tax=Eubacterium rectale CAG:36 RepID=R6UUP3_9FIRM
Exonuclease RecJ {ECO:0000313|EMBL:CDC74437.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
SsDNA exonuclease, RecJ
L1_007_000M1_scaffold_1134_5
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5935..6699)
DNA (765bp) protein (255aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
tRNA pseudouridine synthase A n=2 Tax=Eubacterium RepID=C4Z854_EUBR3
tRNA pseudouridine synthase A
L1_007_000M1_scaffold_1134_6
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6809..8071)
DNA (1263bp) protein (421aa)
Putative peptidoglycan-binding domain-containing protein n=2 Tax=Eubacterium rectale RepID=D6E0A6_9FIRM
Putative peptidoglycan-binding domain-containing protein
Putative peptidoglycan-binding domain-containing protein {ECO:0000313|EMBL:CBK91277.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L1_007_000M1_scaffold_1134_7
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8328..8834
DNA (507bp) protein (169aa)
Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family n=1 Tax=Eubacterium rectale M104/1 RepID=D4JJH5_9FIRM
Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family
Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family {ECO:0000313|EMBL:CBK93772.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L1_007_000M1_scaffold_1134_8
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9197..9709)
DNA (513bp) protein (171aa)
IlvH n=3 Tax=Eubacterium rectale RepID=C4Z7Z4_EUBR3
IlvH
IlvH {ECO:0000313|EMBL:ACR75011.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L1_007_000M1_scaffold_1134_9
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9722..11443)
DNA (1722bp) protein (574aa)
acetolactate synthase, large subunit, biosynthetic type (EC:2.2.1.6)
Acetolactate synthase {ECO:0000256|RuleBase:RU003591}; EC=2.2.1.6 {ECO:0000256|RuleBase:RU003591, ECO:0000313|EMBL:CBK93774.1};; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
Acetolactate synthase n=1 Tax=Eubacterium rectale M104/1 RepID=D4JJH7_9FIRM
L1_007_000M1_scaffold_1134_10
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11475..11966)
DNA (492bp) protein (164aa)
Dihydrofolate reductase {ECO:0000256|PIRNR:PIRNR000194, ECO:0000313|EMBL:CBK93775.1}; EC=1.5.1.3 {ECO:0000256|PIRNR:PIRNR000194, ECO:0000313|EMBL:CBK93775.1};; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
Dihydrofolate reductase n=3 Tax=Eubacterium rectale RepID=C4Z7Z2_EUBR3
dihydrofolate reductase
L1_007_000M1_scaffold_1134_11
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12050..12898)
DNA (849bp) protein (283aa)
Thymidylate synthase {ECO:0000313|EMBL:CBK93776.1}; EC=2.1.1.45 {ECO:0000313|EMBL:CBK93776.1};; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
Thymidylate synthase n=4 Tax=Eubacterium RepID=C4Z7Z1_EUBR3
thymidylate synthase
L1_007_000M1_scaffold_1134_12
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13332..14270
DNA (939bp) protein (313aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
tRNA-dihydrouridine synthase n=1 Tax=Eubacterium rectale CAG:36 RepID=R6TQB7_9FIRM
putative protein involved in tRNA-dihydrouridine synthesis
L1_007_000M1_scaffold_1134_13
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14283..14972)
DNA (690bp) protein (230aa)
Predicted short-chain dehydrogenases/reductase n=2 Tax=Eubacterium RepID=C4Z7Y8_EUBR3
putative short-chain dehydrogenases/reductase
Predicted short-chain dehydrogenases/reductase {ECO:0000313|EMBL:CDC74397.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
L1_007_000M1_scaffold_1134_14
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15028..16029)
DNA (1002bp) protein (334aa)
Uncharacterized protein n=1 Tax=Eubacterium rectale CAG:36 RepID=R6TQC4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC74400.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
hypothetical protein
L1_007_000M1_scaffold_1134_15
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16044..16913)
DNA (870bp) protein (290aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale M104/1 RepID=D4JJI3_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK93780.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L1_007_000M1_scaffold_1134_16
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16955..18442)
DNA (1488bp) protein (496aa)
ATPase family associated with various cellular activities (AAA) n=1 Tax=Eubacterium rectale M104/1 RepID=D4JJI4_9FIRM
ATPase family associated with various cellular activities (AAA).
ATPase family associated with various cellular activities (AAA) {ECO:0000313|EMBL:CBK93781.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L1_007_000M1_scaffold_1134_17
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18406..19761)
DNA (1356bp) protein (452aa)
Uncharacterized protein conserved in bacteria n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E095_9FIRM
hypothetical protein
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CBK91266.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L1_007_000M1_scaffold_1134_18
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19879..20886)
DNA (1008bp) protein (336aa)
Putative uncharacterized protein n=2 Tax=Eubacterium rectale RepID=D4JJI6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK91265.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L1_007_000M1_scaffold_1134_19
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20959..21366)
DNA (408bp) protein (136aa)
Nucleotidyltransferase substrate binding protein, HI0074 family n=3 Tax=Eubacterium rectale RepID=D4JJI7_9FIRM
nucleotidyltransferase substrate binding protein, HI0074 family
Nucleotidyltransferase substrate binding protein, HI0074 family {ECO:0000313|EMBL:CBK91264.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L1_007_000M1_scaffold_1134_20
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21350..21619)
DNA (270bp) protein (90aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZHI3_EUBR3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR74995.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L1_007_000M1_scaffold_1134_21
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22004..24085)
DNA (2082bp) protein (694aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZHI2_EUBR3
Uncharacterized protein {ECO:0000313|EMBL:ACR74994.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
hypothetical protein
L1_007_000M1_scaffold_1134_22
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24104..24442)
DNA (339bp) protein (113aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZHI1_EUBR3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR74993.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L1_007_000M1_scaffold_1134_23
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(24612..24887)
DNA (276bp) protein (92aa)
Acetyltransferase, GNAT family n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FWY5_9FIRM
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EEG92944.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
Predicted P-loop ATPase fused to an acetyltransferase
L1_007_000M1_scaffold_1134_24
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(24956..25366)
DNA (411bp) protein (137aa)
Hemerythrin-like metal-binding domain n=3 Tax=Eubacterium rectale RepID=D4JJJ1_9FIRM
hemerythrin-like metal-binding domain
Hemerythrin-like metal-binding domain {ECO:0000313|EMBL:CBK93788.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L1_007_000M1_scaffold_1134_25
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(25451..25714)
DNA (264bp) protein (88aa)
Response regulator receiver modulated metal dependent phosphohydrolase n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZHH7_EUBR3
uncharacterized domain HDIG
Response regulator receiver modulated metal dependent phosphohydrolase {ECO:0000313|EMBL:CDC74417.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
Displaying 25 items

View Taxonomy