ggKbase home page

L1_007_000M1_scaffold_16

Search features with annotation key words

Displaying items 31-60 of 232 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_16_31
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36232..37515
DNA (1284bp) protein (428aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale M104/1 RepID=D4JLN0_9FIRM
conserved hypothetical protein TIGR00275
Uncharacterized protein {ECO:0000313|EMBL:CBK94527.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L1_007_000M1_scaffold_16_32
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37630..38292
DNA (663bp) protein (221aa)
cytidylate kinase (EC:2.7.4.14)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00238};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00238};; Cytidine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
Cytidylate kinase n=3 Tax=Eubacterium rectale RepID=C4Z9F8_EUBR3
L1_007_000M1_scaffold_16_33
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

38296..39156
DNA (861bp) protein (287aa)
(E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) (EC:1.17.1.2)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570};; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=3 Tax=Eubacterium RepID=C4Z9F9_EUBR3
L1_007_000M1_scaffold_16_34
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

39137..40252
DNA (1116bp) protein (372aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase/S1 RNA-binding domain protein n=4 Tax=Eubacterium RepID=C4Z9G0_EUBR3
Ribosomal protein S1
Ribosomal protein S1 {ECO:0000313|EMBL:CBK94524.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L1_007_000M1_scaffold_16_35
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

40331..41107
DNA (777bp) protein (259aa)
Methylase of chemotaxis methyl-accepting proteins n=1 Tax=Eubacterium rectale CAG:36 RepID=R6U0Q8_9FIRM
Methylase of chemotaxis methyl-accepting proteins {ECO:0000313|EMBL:CDC73716.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
protein-glutamate O-methyltransferase
L1_007_000M1_scaffold_16_36
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(41115..42212)
DNA (1098bp) protein (366aa)
Possible elongation subunit of DNA-dependent DNA polymerase n=2 Tax=Eubacterium rectale RepID=C4Z9G2_EUBR3
DNA polymerase family B, exonuclease domain.
Possible elongation subunit of DNA-dependent DNA polymerase {ECO:0000313|EMBL:ACR75384.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L1_007_000M1_scaffold_16_37
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

42379..43710
DNA (1332bp) protein (444aa)
Electron transport complex protein RnfC n=2 Tax=Eubacterium rectale RepID=C4Z9G3_EUBR3
rnfC/nqrF
Electron transport complex subunit C {ECO:0000256|HAMAP-Rule:MF_00461}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L1_007_000M1_scaffold_16_38
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

43729..44691
DNA (963bp) protein (321aa)
NADH:ubiquinone oxidoreductase Na translocating B subunit n=1 Tax=Eubacterium rectale CAG:36 RepID=R6U0R7_9FIRM
Electron transport complex subunit D {ECO:0000256|HAMAP-Rule:MF_00462}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
NADH:ubiquinone oxidoreductase, Na translocating, B subunit
L1_007_000M1_scaffold_16_39
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

44684..45292
DNA (609bp) protein (203aa)
Electron transport complex, RnfABCDGE type, G subunit n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E4J2_9FIRM
electron transport complex, RnfABCDGE type, G subunit
Electron transport complex subunit G {ECO:0000256|HAMAP-Rule:MF_00479}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L1_007_000M1_scaffold_16_40
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

45292..46020
DNA (729bp) protein (243aa)
RnfE/nqrD n=3 Tax=Eubacterium RepID=C4Z9G6_EUBR3
electron transport complex, RnfABCDGE type, E subunit
Electron transport complex subunit E {ECO:0000256|HAMAP-Rule:MF_00478}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L1_007_000M1_scaffold_16_41
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

46020..46610
DNA (591bp) protein (197aa)
Na(+)-translocating NADH-quinone reductase subunit D n=4 Tax=Eubacterium RepID=C4Z9G7_EUBR3
electron transport complex, RnfABCDGE type, A subunit
Electron transport complex subunit A {ECO:0000256|HAMAP-Rule:MF_00459}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L1_007_000M1_scaffold_16_42
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

46629..47420
DNA (792bp) protein (264aa)
Ferredoxin n=4 Tax=Eubacterium RepID=C4Z9G8_EUBR3
ferredoxin
Electron transport complex, RnfABCDGE type, B subunit {ECO:0000313|EMBL:CBK90335.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L1_007_000M1_scaffold_16_43
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(47479..48528)
DNA (1050bp) protein (350aa)
Membrane-associated lipoprotein involved in thiamine biosynthesis n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4Z9G9_EUBR3
thiamine biosynthesis lipoprotein
Membrane-associated lipoprotein involved in thiamine biosynthesis {ECO:0000313|EMBL:ACR75391.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L1_007_000M1_scaffold_16_44
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

48747..49646
DNA (900bp) protein (300aa)
Glutamate 5-kinase {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442}; EC=2.7.2.11 {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442};; Gamma-glutamyl kinase {ECO:0000256|HAMAP-Rule:MF_00456}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
Glutamate 5-kinase n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4Z9H0_EUBR3
glutamate 5-kinase
L1_007_000M1_scaffold_16_45
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

49678..49902
DNA (225bp) protein (75aa)
UPF0291 protein EUBREC_1649 n=4 Tax=Eubacterium RepID=C4Z9H1_EUBR3
hypothetical protein
UPF0291 protein BN626_01293 {ECO:0000256|HAMAP-Rule:MF_01103}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
L1_007_000M1_scaffold_16_46
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

49877..50452
DNA (576bp) protein (192aa)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279};; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
Putative ligase n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4Z9H2_EUBR3
putative ligase
L1_007_000M1_scaffold_16_47
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

50445..51701
DNA (1257bp) protein (419aa)
glutamate-5-semialdehyde dehydrogenase (EC:1.2.1.41)
Gamma-glutamyl phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00054156}; Short=GPR {ECO:0000256|HAMAP-Rule:MF_00412};; EC=1.2.1.41 {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00186003};; Glutamate-5-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; Glutamyl-gamma-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
Gamma-glutamyl phosphate reductase n=2 Tax=Eubacterium rectale RepID=D4JLL5_9FIRM
L1_007_000M1_scaffold_16_48
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

51749..53188
DNA (1440bp) protein (480aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=1 Tax=Eubacterium rectale CAG:36 RepID=R6TJY2_9FIRM
tRNA-i(6)A37 thiotransferase enzyme MiaB
L1_007_000M1_scaffold_16_49
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

53181..53579
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Eubacterium rectale CAG:36 RepID=R6TNG9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC73745.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
hypothetical protein
L1_007_000M1_scaffold_16_50
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

53613..54110
DNA (498bp) protein (166aa)
Heptaprenyl diphosphate synthase component I n=2 Tax=Eubacterium rectale RepID=C4Z9V7_EUBR3
heptaprenyl diphosphate synthase component I
Predicted membrane protein {ECO:0000313|EMBL:CBK94509.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L1_007_000M1_scaffold_16_51
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

54204..54821
DNA (618bp) protein (206aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
Holliday junction ATP-dependent DNA helicase RuvA n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4Z9V8_EUBR3
ruvA; Holliday junction DNA helicase RuvA
L1_007_000M1_scaffold_16_52
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

54864..55856
DNA (993bp) protein (331aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
ruvB; Holliday junction DNA helicase RuvB (EC:3.6.1.-)
Holliday junction ATP-dependent DNA helicase RuvB n=1 Tax=Roseburia sp. CAG:197 RepID=R5Z8E4_9FIRM
L1_007_000M1_scaffold_16_53
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

55979..56452
DNA (474bp) protein (158aa)
Cell division protein ZapA n=4 Tax=Eubacterium RepID=D4JLL0_9FIRM
cell division protein ZapA
Cell division protein ZapA {ECO:0000256|SAAS:SAAS00072473}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L1_007_000M1_scaffold_16_54
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

56540..58666
DNA (2127bp) protein (709aa)
Peptidase, U32 family n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4Z9W2_EUBR3
peptidase, U32 family
Peptidase, U32 family {ECO:0000313|EMBL:ACR75403.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L1_007_000M1_scaffold_16_55
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

58668..60125
DNA (1458bp) protein (486aa)
Bacterial cell division membrane protein n=1 Tax=Eubacterium rectale CAG:36 RepID=R6U0U4_9FIRM
Bacterial cell division membrane protein
Bacterial cell division membrane protein {ECO:0000313|EMBL:CBK94505.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L1_007_000M1_scaffold_16_56
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

60172..61518
DNA (1347bp) protein (449aa)
Cell division protein FtsI/penicillin-binding protein 2 n=1 Tax=Eubacterium rectale M104/1 RepID=D4JLK7_9FIRM
Cell division protein FtsI/penicillin-binding protein 2
Cell division protein FtsI/penicillin-binding protein 2 {ECO:0000313|EMBL:CBK94504.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L1_007_000M1_scaffold_16_57
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

61633..62085
DNA (453bp) protein (151aa)
AP4A hydrolase n=4 Tax=Eubacterium RepID=C4Z9W5_EUBR3
ADP-ribose pyrophosphatase
AP4A hydrolase {ECO:0000313|EMBL:ACR75406.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L1_007_000M1_scaffold_16_58
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

62131..62451
DNA (321bp) protein (107aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4Z9W6_EUBR3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR75407.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L1_007_000M1_scaffold_16_59
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

62456..63364
DNA (909bp) protein (303aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E4L1_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK90351.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L1_007_000M1_scaffold_16_60
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

63377..63772
DNA (396bp) protein (132aa)
Uncharacterized conserved protein n=3 Tax=Eubacterium RepID=D4JLK3_9FIRM
hypothetical protein
Uncharacterized conserved protein {ECO:0000313|EMBL:CBK94500.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
Displaying items 31-60 of 232 in total

View Taxonomy