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L1_007_000M1_scaffold_16

Search features with annotation key words

Displaying items 1-30 of 232 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_16_1
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..307
DNA (306bp) protein (102aa)
Putative uncharacterized protein n=2 Tax=Eubacterium rectale RepID=C4Z9C0_EUBR3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR75342.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L1_007_000M1_scaffold_16_2
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(493..4758)
DNA (4266bp) protein (1422aa)
Putative R-2-hydroxyglutaryl-CoA dehydratase subunit/R-2-hydroxyglutaryl-CoA dehydratase activase n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4Z9C2_EUBR3
Putative R-2-hydroxyglutaryl-CoA dehydratase subunit/R-2-hydroxyglutaryl-CoA dehydratase activase {ECO:0000313|EMBL:ACR75344.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
putative R-2-hydroxyglutaryl-CoA dehydratase subunit/R-2-hydroxyglutaryl-CoA dehydratase activase
L1_007_000M1_scaffold_16_3
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5110..5952
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Eubacterium rectale CAG:36 RepID=R6USE5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC73652.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
hypothetical protein
L1_007_000M1_scaffold_16_4
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6039..7724
DNA (1686bp) protein (562aa)
glutaminyl-tRNA synthetase (EC:6.1.1.18)
Glutamine--tRNA ligase {ECO:0000256|SAAS:SAAS00023088}; EC=6.1.1.18 {ECO:0000256|SAAS:SAAS00023088, ECO:0000313|EMBL:CBK94551.1};; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
Glutaminyl-tRNA synthetase n=1 Tax=Eubacterium rectale M104/1 RepID=D4JGF2_9FIRM
L1_007_000M1_scaffold_16_5
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7768..8625
DNA (858bp) protein (286aa)
Uncharacterized protein conserved in bacteria n=3 Tax=Eubacterium rectale RepID=D4JGF1_9FIRM
hypothetical protein
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CBK90301.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L1_007_000M1_scaffold_16_6
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8670..9896)
DNA (1227bp) protein (409aa)
argininosuccinate synthase (EC:6.3.4.5)
Argininosuccinate synthase {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00013047}; EC=6.3.4.5 {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00009947};; Citrulline--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00005}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
Argininosuccinate synthase n=4 Tax=Eubacterium RepID=ASSY_EUBR3
L1_007_000M1_scaffold_16_7
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10104..11228
DNA (1125bp) protein (375aa)
N-acetyl-gamma-glutamyl-phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00150, ECO:0000256|SAAS:SAAS00137393}; Short=AGPR {ECO:0000256|HAMAP-Rule:MF_00150};; EC=1.2.1.38 {ECO:0000256|HAMAP-Rule:MF_00150, ECO:0000256|SAAS:SAAS00137393};; N-acetyl-glutamate semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00150}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
N-acetyl-gamma-glutamyl-phosphate reductase n=3 Tax=Eubacterium rectale RepID=C4Z9D0_EUBR3
argC; N-acetyl-gamma-glutamyl-phosphate reductase
L1_007_000M1_scaffold_16_8
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11312..11776
DNA (465bp) protein (155aa)
Uncharacterized protein n=2 Tax=Eubacterium RepID=R6USF9_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR75353.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L1_007_000M1_scaffold_16_9
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11788..12690
DNA (903bp) protein (301aa)
acetylglutamate kinase (EC:2.7.2.8)
Acetylglutamate kinase {ECO:0000256|HAMAP-Rule:MF_00082, ECO:0000256|SAAS:SAAS00245375}; EC=2.7.2.8 {ECO:0000256|HAMAP-Rule:MF_00082, ECO:0000256|SAAS:SAAS00245383};; N-acetyl-L-glutamate 5-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00082}; NAG kinase {ECO:0000256|HAMAP-Rule:MF_00082}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
Acetylglutamate kinase n=3 Tax=Eubacterium rectale RepID=C4Z9D2_EUBR3
L1_007_000M1_scaffold_16_10
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12680..13897
DNA (1218bp) protein (406aa)
acetylornithine aminotransferase apoenzyme (EC:2.6.1.11)
Acetylornithine aminotransferase {ECO:0000256|HAMAP-Rule:MF_01107}; Short=ACOAT {ECO:0000256|HAMAP-Rule:MF_01107};; EC=2.6.1.11 {ECO:0000256|HAMAP-Rule:MF_01107, ECO:0000313|EMBL:CBK90306.1};; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
Acetylornithine aminotransferase n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E4G6_9FIRM
L1_007_000M1_scaffold_16_11
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13955..14662
DNA (708bp) protein (236aa)
Competence protein ComEA helix-hairpin-helix repeat region n=2 Tax=Eubacterium RepID=D4JLP7_9FIRM
competence protein ComEA helix-hairpin-helix repeat region
Competence protein ComEA helix-hairpin-helix repeat region {ECO:0000313|EMBL:CBK94544.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L1_007_000M1_scaffold_16_12
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14673..15365
DNA (693bp) protein (231aa)
Response regulators consisting of a CheY-like receiver domain and a HTH DNA-binding domain n=4 Tax=Eubacterium RepID=C4Z9D5_EUBR3
response regulators consisting of a CheY-like receiver domain and a HTH DNA-binding domain
Response regulators consisting of a CheY-like receiver domain and a HTH DNA-binding domain {ECO:0000313|EMBL:ACR75357.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L1_007_000M1_scaffold_16_13
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15387..16838
DNA (1452bp) protein (484aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121, ECO:0000313|EMBL:CBK94542.1};; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
Signal transduction histidine kinase n=4 Tax=Eubacterium RepID=C4Z9D6_EUBR3
signal transduction histidine kinase
L1_007_000M1_scaffold_16_14
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16849..17793
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Eubacterium rectale CAG:36 RepID=R6TJS7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC73673.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
hypothetical protein
L1_007_000M1_scaffold_16_15
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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17841..20204
DNA (2364bp) protein (788aa)
Putative integral membrane protein n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4Z9D8_EUBR3
putative integral membrane protein
Putative integral membrane protein {ECO:0000313|EMBL:ACR75360.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L1_007_000M1_scaffold_16_16
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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20185..21195
DNA (1011bp) protein (337aa)
DNA polymerase III, delta subunit (EC:2.7.7.7)
DNA polymerase III, delta subunit {ECO:0000313|EMBL:CBK90311.1}; EC=2.7.7.7 {ECO:0000313|EMBL:CBK90311.1};; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
DNA polymerase III, delta subunit n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E4H1_9FIRM
L1_007_000M1_scaffold_16_17
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(21294..21557)
DNA (264bp) protein (88aa)
30S ribosomal protein S20 n=1 Tax=Eubacterium rectale CAG:36 RepID=R6TV31_9FIRM
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
rpsT; 30S ribosomal protein S20
L1_007_000M1_scaffold_16_18
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21738..22649
DNA (912bp) protein (304aa)
Germination protease {ECO:0000256|HAMAP-Rule:MF_00626}; EC=3.4.24.78 {ECO:0000256|HAMAP-Rule:MF_00626};; GPR endopeptidase {ECO:0000256|HAMAP-Rule:MF_00626}; Germination proteinase {ECO:0000256|HAMAP-Rule:MF_00626}; Spore protease {ECO:0000256|HAMAP-Rule:MF_00626}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
Germination protease n=2 Tax=Eubacterium RepID=C4Z9E1_EUBR3
germination protease
L1_007_000M1_scaffold_16_19
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22721..23818
DNA (1098bp) protein (366aa)
Stage II sporulation protein P n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E4H2_9FIRM
stage II sporulation protein P
Stage II sporulation protein P {ECO:0000313|EMBL:CBK90312.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L1_007_000M1_scaffold_16_20
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23882..25693
DNA (1812bp) protein (604aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
Elongation factor 4 n=4 Tax=Eubacterium RepID=LEPA_EUBR3
GTP-binding protein LepA
L1_007_000M1_scaffold_16_21
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25702..26895
DNA (1194bp) protein (398aa)
Oxygen-independent coproporphyrinogen III oxidase n=2 Tax=Eubacterium RepID=C4Z9E4_EUBR3
oxygen-independent coproporphyrinogen III oxidase
Oxygen-independent coproporphyrinogen III oxidase {ECO:0000313|EMBL:ACR75366.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L1_007_000M1_scaffold_16_22
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26909..27658
DNA (750bp) protein (250aa)
Segregation and condensation protein A n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E4H5_9FIRM
hypothetical protein
Segregation and condensation protein A {ECO:0000256|HAMAP-Rule:MF_01805, ECO:0000256|SAAS:SAAS00093938}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L1_007_000M1_scaffold_16_23
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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27676..28239
DNA (564bp) protein (188aa)
Segregation and condensation protein B n=4 Tax=Eubacterium RepID=SCPB_EUBR3
segregation and condensation protein B
Segregation and condensation protein B {ECO:0000256|HAMAP-Rule:MF_01804, ECO:0000256|SAAS:SAAS00086417}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
L1_007_000M1_scaffold_16_24
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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28321..29436
DNA (1116bp) protein (372aa)
D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4)
Serine-type D-Ala-D-Ala carboxypeptidase n=1 Tax=Eubacterium rectale CAG:36 RepID=R6USJ4_9FIRM
Serine-type D-Ala-D-Ala carboxypeptidase {ECO:0000313|EMBL:CDC73697.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
L1_007_000M1_scaffold_16_25
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29544..30980
DNA (1437bp) protein (479aa)
Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) (EC:6.4.1.3)
Acetyl-CoA carboxylase, carboxyltransferase component (Subunits alpha and beta) {ECO:0000313|EMBL:CBK94533.1}; EC=6.4.1.3 {ECO:0000313|EMBL:CBK94533.1};; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
Acetyl-CoA carboxylase, carboxyltransferase component (Subunits alpha and beta) n=3 Tax=Eubacterium RepID=D4JLN6_9FIRM
L1_007_000M1_scaffold_16_26
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31000..31821
DNA (822bp) protein (274aa)
Oxaloacetate decarboxylase gamma chain {ECO:0000256|RuleBase:RU004278}; EC=4.1.1.3 {ECO:0000256|RuleBase:RU004278};; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
Oxaloacetate decarboxylase gamma chain n=2 Tax=Eubacterium rectale RepID=D4JLN5_9FIRM
sodium pump decarboxylases, gamma subunit
L1_007_000M1_scaffold_16_27
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31840..32202
DNA (363bp) protein (121aa)
Biotin carboxyl carrier protein n=2 Tax=Eubacterium rectale RepID=D4JLN4_9FIRM
Biotin carboxyl carrier protein
Biotin carboxyl carrier protein {ECO:0000313|EMBL:CBK94531.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L1_007_000M1_scaffold_16_28
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32222..33370
DNA (1149bp) protein (383aa)
Sodium ion-translocating decarboxylase beta subunit n=1 Tax=Roseburia sp. CAG:18 RepID=R5V4D7_9FIRM
Sodium ion-translocating decarboxylase beta subunit {ECO:0000313|EMBL:CDC73706.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
sodium ion-translocating decarboxylase, beta subunit
L1_007_000M1_scaffold_16_29
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33393..34811
DNA (1419bp) protein (473aa)
Oxaloacetate decarboxylase n=4 Tax=Eubacterium RepID=C4Z9F2_EUBR3
oxaloacetate decarboxylase
Oxaloacetate decarboxylase {ECO:0000313|EMBL:ACR75374.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L1_007_000M1_scaffold_16_30
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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35310..36239
DNA (930bp) protein (310aa)
Transcriptional regulators n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E4I4_9FIRM
Transcriptional regulators
Transcriptional regulators {ECO:0000313|EMBL:CBK90324.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
Displaying items 1-30 of 232 in total

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