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L1_007_000M1_scaffold_74

Search features with annotation key words

Displaying items 31-60 of 119 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_74_31
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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35068..35673
DNA (606bp) protein (202aa)
RNA polymerase factor sigma-70 n=2 Tax=Eubacterium RepID=C4Z8X2_EUBR3
RNA polymerase factor sigma-70
RNA polymerase factor sigma-70 {ECO:0000313|EMBL:ACR75204.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L1_007_000M1_scaffold_74_32
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35686..36342
DNA (657bp) protein (219aa)
Negative regulator of genetic competence, sporulation and motility n=3 Tax=Eubacterium RepID=D6E422_9FIRM
Negative regulator of genetic competence, sporulation and motility
Uncharacterized protein {ECO:0000313|EMBL:ACR75205.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L1_007_000M1_scaffold_74_33
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36422..36781)
DNA (360bp) protein (120aa)
Two-component response regulator involved in modulation of flagellar n=4 Tax=Eubacterium RepID=C4Z8X5_EUBR3
Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
Two-component response regulator involved in modulation of flagellar {ECO:0000313|EMBL:ACR75206.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L1_007_000M1_scaffold_74_34
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36786..37364)
DNA (579bp) protein (193aa)
Flagellar motor switch protein n=3 Tax=Eubacterium RepID=C4Z8X6_EUBR3
Chemotaxis protein CheC, inhibitor of MCP methylation
Flagellar motor switch protein {ECO:0000313|EMBL:ACR75207.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L1_007_000M1_scaffold_74_35
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37495..39402
DNA (1908bp) protein (636aa)
Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein n=1 Tax=Eubacterium rectale M104/1 RepID=D4JIY8_9FIRM
Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein {ECO:0000313|EMBL:CBK93585.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein
L1_007_000M1_scaffold_74_36
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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39402..39992
DNA (591bp) protein (197aa)
Predicted phosphoesterases, related to the Icc protein n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E418_9FIRM
Predicted phosphoesterases, related to the Icc protein
Predicted phosphoesterases, related to the Icc protein {ECO:0000313|EMBL:CBK90158.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L1_007_000M1_scaffold_74_37
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(40435..41247)
DNA (813bp) protein (271aa)
Soluble lytic murein transglycosylase and related regulatory proteins (Some contain LysM/invasin domains) n=2 Tax=Eubacterium RepID=D6E417_9FIRM
Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)
Soluble lytic murein transglycosylase and related regulatory proteins (Some contain LysM/invasin domains) {ECO:0000313|EMBL:CBK90157.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L1_007_000M1_scaffold_74_38
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

41437..42705
DNA (1269bp) protein (423aa)
Diaminopimelate decarboxylase (EC:4.1.1.20)
Diaminopimelate decarboxylase {ECO:0000313|EMBL:CBK90156.1}; EC=4.1.1.20 {ECO:0000313|EMBL:CBK90156.1};; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
Diaminopimelate decarboxylase n=4 Tax=Eubacterium RepID=C4Z8Y0_EUBR3
L1_007_000M1_scaffold_74_39
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(42710..43447)
DNA (738bp) protein (246aa)
Helix-turn-helix n=3 Tax=Eubacterium RepID=D4JIY4_9FIRM
Helix-turn-helix.
Helix-turn-helix {ECO:0000313|EMBL:CBK90155.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L1_007_000M1_scaffold_74_40
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

43788..44063
DNA (276bp) protein (92aa)
Uncharacterized protein n=4 Tax=Eubacterium RepID=R6TZL4_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR75213.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L1_007_000M1_scaffold_74_41
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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44070..46043
DNA (1974bp) protein (658aa)
Fructose-1,6-bisphosphatase class 3 {ECO:0000256|HAMAP-Rule:MF_01854}; Short=FBPase class 3 {ECO:0000256|HAMAP-Rule:MF_01854};; EC=3.1.3.11 {ECO:0000256|HAMAP-Rule:MF_01854};; D-fructose-1,6-bisphosphate 1-phosphohydrolase class 3 {ECO:0000256|HAMAP-Rule:MF_01854}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
hypothetical protein (EC:3.1.3.11)
Fructose-1,6-bisphosphatase class 3 n=3 Tax=Eubacterium rectale RepID=C4Z8Y3_EUBR3
L1_007_000M1_scaffold_74_42
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

46058..46597
DNA (540bp) protein (180aa)
Uncharacterized protein n=4 Tax=Eubacterium RepID=R6TZM1_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR75215.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L1_007_000M1_scaffold_74_43
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

46585..47265
DNA (681bp) protein (227aa)
Uncharacterized protein n=2 Tax=Eubacterium RepID=R6TIT0_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDC73328.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
L1_007_000M1_scaffold_74_44
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

47310..48785
DNA (1476bp) protein (492aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
Sensor histidine kinase n=4 Tax=Eubacterium RepID=C4Z8Y6_EUBR3
His Kinase A (phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./HAMP domain.
L1_007_000M1_scaffold_74_45
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

48845..49582
DNA (738bp) protein (246aa)
Telomeric repeat-binding factor 2 n=3 Tax=Eubacterium rectale RepID=D4JIX9_9FIRM
Telomeric repeat-binding factor 2.
Uncharacterized protein {ECO:0000313|EMBL:ACR75218.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L1_007_000M1_scaffold_74_46
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

49626..50525
DNA (900bp) protein (300aa)
Modulation of CheA activity in response to attractants (Chemotaxis protein) n=4 Tax=Eubacterium RepID=C4Z8Y8_EUBR3
Chemotaxis signal transduction protein
Modulation of CheA activity in response to attractants (Chemotaxis protein) {ECO:0000313|EMBL:ACR75219.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L1_007_000M1_scaffold_74_47
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

50595..52130
DNA (1536bp) protein (512aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E408_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK90148.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L1_007_000M1_scaffold_74_48
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

52132..52746
DNA (615bp) protein (205aa)
imidazole glycerol phosphate synthase, glutamine amidotransferase subunit (EC:2.4.2.-)
Imidazole glycerol phosphate synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00278};; IGP synthase glutamine amidotransferase subunit {ECO:0000256|HAMAP-Rule:MF_00278}; IGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; ImGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
Imidazole glycerol phosphate synthase subunit HisH n=3 Tax=Eubacterium rectale RepID=C4Z8Z0_EUBR3
L1_007_000M1_scaffold_74_49
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

52748..53509
DNA (762bp) protein (254aa)
imidazoleglycerol phosphate synthase, cyclase subunit (EC:4.1.3.-)
Imidazole glycerol phosphate synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; EC=4.1.3.- {ECO:0000256|HAMAP-Rule:MF_01013, ECO:0000313|EMBL:CBK93571.1};; IGP synthase cyclase subunit {ECO:0000256|HAMAP-Rule:MF_01013}; IGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; ImGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
Imidazole glycerol phosphate synthase subunit HisF n=3 Tax=Eubacterium RepID=D4JIX4_9FIRM
L1_007_000M1_scaffold_74_50
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

53526..54203
DNA (678bp) protein (226aa)
Uracil-DNA glycosylase (EC:3.2.2.-)
Uracil-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780}; Short=UDG {ECO:0000256|HAMAP-Rule:MF_00148};; EC=3.2.2.27 {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780};; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
Uracil-DNA glycosylase n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E405_9FIRM
L1_007_000M1_scaffold_74_51
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

54346..55065
DNA (720bp) protein (240aa)
Flagellar hook-associated protein 2 C-terminus n=3 Tax=Eubacterium RepID=D4JIX2_9FIRM
Flagellar hook-associated protein 2 C-terminus.
Flagellar hook-associated protein 2 C-terminus {ECO:0000313|EMBL:CBK90144.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L1_007_000M1_scaffold_74_52
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(55157..56797)
DNA (1641bp) protein (547aa)
ATPase components of ABC transporters with duplicated ATPase domains n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E403_9FIRM
ATPase components of ABC transporters with duplicated ATPase domains
ATPase components of ABC transporters with duplicated ATPase domains {ECO:0000313|EMBL:CBK90143.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L1_007_000M1_scaffold_74_53
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

57082..60639
DNA (3558bp) protein (1186aa)
Pyruvate-flavodoxin oxidoreductase {ECO:0000256|PIRNR:PIRNR000159}; EC=1.2.7.- {ECO:0000256|PIRNR:PIRNR000159, ECO:0000313|EMBL:CBK93567.1};; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric (EC:1.2.7.-)
Pyruvate-flavodoxin oxidoreductase n=4 Tax=Eubacterium RepID=C4Z8Z5_EUBR3
L1_007_000M1_scaffold_74_54
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

60810..61772
DNA (963bp) protein (321aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E401_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK90141.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L1_007_000M1_scaffold_74_55
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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61864..63513
DNA (1650bp) protein (550aa)
Inorganic pyrophosphatase/exopolyphosphatase {ECO:0000313|EMBL:CBK90140.1}; EC=3.6.1.1 {ECO:0000313|EMBL:CBK90140.1};; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
Inorganic pyrophosphatase/exopolyphosphatase (EC:3.6.1.1)
Inorganic pyrophosphatase/exopolyphosphatase n=2 Tax=Eubacterium RepID=D6E400_9FIRM
L1_007_000M1_scaffold_74_56
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(63563..64399)
DNA (837bp) protein (279aa)
Positive regulator for rhaBAD operon n=4 Tax=Eubacterium RepID=C4Z8Z9_EUBR3
AraC-type DNA-binding domain-containing proteins
AraC-type DNA-binding domain-containing proteins {ECO:0000313|EMBL:CBK93564.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L1_007_000M1_scaffold_74_57
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

64550..65407
DNA (858bp) protein (286aa)
diaminopimelate epimerase (EC:5.1.1.7)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028063};; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
Diaminopimelate epimerase n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E3Z8_9FIRM
L1_007_000M1_scaffold_74_58
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

65525..66997
DNA (1473bp) protein (491aa)
UDP-N-acetylmuramyl-tripeptide synthetases (EC:6.3.2.13)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; EC=6.3.2.13 {ECO:0000256|HAMAP-Rule:MF_00208, ECO:0000313|EMBL:CBK90137.1};; Meso-A2pm-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00208}; Meso-diaminopimelate-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-N-acetylmuramyl-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E3Z7_9FIRM
L1_007_000M1_scaffold_74_59
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

67066..67950
DNA (885bp) protein (295aa)
dihydrodipicolinate synthase (EC:4.2.1.52)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086366}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421};; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E3Z6_9FIRM
L1_007_000M1_scaffold_74_60
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

67997..68566
DNA (570bp) protein (190aa)
Nitrilotriacetate monooxygenase component B n=4 Tax=Eubacterium RepID=C4Z903_EUBR3
nitrilotriacetate monooxygenase component B
Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family {ECO:0000313|EMBL:CBK93560.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
Displaying items 31-60 of 119 in total

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