ggKbase home page

L1_007_000M1_scaffold_74

Search features with annotation key words

Displaying items 91-119 of 119 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_74_91
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

97588..98172
DNA (585bp) protein (195aa)
signal peptidase I, bacterial type (EC:3.4.21.89)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042, ECO:0000313|EMBL:CBK93529.1};; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
Signal peptidase I n=3 Tax=Eubacterium rectale RepID=C4Z934_EUBR3
L1_007_000M1_scaffold_74_92
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

98212..99057
DNA (846bp) protein (282aa)
Ribosome biogenesis GTPase A n=1 Tax=Eubacterium rectale M104/1 RepID=D4JIT1_9FIRM
ribosome biogenesis GTP-binding protein YlqF
Ribosome biogenesis GTPase A {ECO:0000256|PIRNR:PIRNR006230}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L1_007_000M1_scaffold_74_93
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

99095..99856
DNA (762bp) protein (254aa)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016872};; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
Ribonuclease HII n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4Z936_EUBR3
rnhB; ribonuclease HII
L1_007_000M1_scaffold_74_94
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

99949..100854
DNA (906bp) protein (302aa)
Transcriptional regulator, LysR family n=3 Tax=Eubacterium RepID=C4Z946_EUBR3
LysR family transcriptional regulator
Transcriptional regulator LysR family {ECO:0000313|EMBL:CDC68818.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
L1_007_000M1_scaffold_74_95
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

101132..101365
DNA (234bp) protein (78aa)
Uncharacterized protein n=4 Tax=Eubacterium RepID=R6TLU2_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR75269.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L1_007_000M1_scaffold_74_96
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

101421..103889
DNA (2469bp) protein (823aa)
Putative ATP-dependent DNA-repair helicase n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4Z948_EUBR3
putative ATP-dependent DNA-repair helicase
Putative ATP-dependent DNA-repair helicase {ECO:0000313|EMBL:ACR75270.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L1_007_000M1_scaffold_74_97
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(103860..104750)
DNA (891bp) protein (297aa)
Transcriptional regulatory protein, LysR family n=2 Tax=Eubacterium RepID=C4Z949_EUBR3
LysR family transcriptional regulator
Transcriptional regulatory protein, LysR family {ECO:0000313|EMBL:ACR75271.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L1_007_000M1_scaffold_74_98
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

105003..108806
DNA (3804bp) protein (1268aa)
phosphoribosylformylglycinamidine synthase (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase {ECO:0000313|EMBL:CBK93522.1}; EC=6.3.5.3 {ECO:0000313|EMBL:CBK93522.1};; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
Phosphoribosylformylglycinamidine synthase n=1 Tax=Eubacterium rectale M104/1 RepID=D4JIS5_9FIRM
L1_007_000M1_scaffold_74_99
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

108988..110283
DNA (1296bp) protein (432aa)
Nicotinate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00570, ECO:0000256|RuleBase:RU003838}; Short=NAPRTase {ECO:0000256|HAMAP-Rule:MF_00570};; EC=6.3.4.21 {ECO:0000256|HAMAP-Rule:MF_00570, ECO:0000256|RuleBase:RU003838};; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
Nicotinate phosphoribosyltransferase n=2 Tax=Eubacterium rectale RepID=C4Z951_EUBR3
nicotinate phosphoribosyltransferase
L1_007_000M1_scaffold_74_100
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(110988..111794)
DNA (807bp) protein (269aa)
histidinol phosphate phosphatase HisJ family (EC:3.1.3.15)
Histidinol phosphate phosphatase HisJ family n=1 Tax=Eubacterium rectale CAG:36 RepID=R6T5Z3_9FIRM
Histidinol phosphate phosphatase HisJ family {ECO:0000313|EMBL:CDC68833.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
L1_007_000M1_scaffold_74_101
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

112111..113127
DNA (1017bp) protein (339aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
Glyceraldehyde-3-phosphate dehydrogenase, type I n=5 Tax=root RepID=C4Z954_EUBR3
glyceraldehyde-3-phosphate dehydrogenase, type I
L1_007_000M1_scaffold_74_102
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

113319..114551
DNA (1233bp) protein (411aa)
3-phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
Phosphoglycerate kinase n=3 Tax=Eubacterium RepID=D4JIS0_9FIRM
L1_007_000M1_scaffold_74_103
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

114710..115459
DNA (750bp) protein (250aa)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
Triosephosphate isomerase n=4 Tax=Eubacterium RepID=C4Z956_EUBR3
tpiA; triosephosphate isomerase
L1_007_000M1_scaffold_74_104
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

115637..117178
DNA (1542bp) protein (514aa)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058362}; Short=BPG-independent PGAM {ECO:0000256|HAMAP-Rule:MF_01038};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01038};; Short=iPGM {ECO:0000256|HAMAP-Rule:MF_01038};; EC=5.4.2.12 {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058367};; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC:5.4.2.1)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=4 Tax=Eubacterium RepID=C4Z957_EUBR3
L1_007_000M1_scaffold_74_105
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

117401..118276
DNA (876bp) protein (292aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194445}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194458};; SAICAR synthetase {ECO:0000256|HAMAP-Rule:MF_00137}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=3 Tax=Eubacterium RepID=C4Z958_EUBR3
phosphoribosylaminoimidazole-succinocarboxamide synthase
L1_007_000M1_scaffold_74_106
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

118326..119888
DNA (1563bp) protein (521aa)
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; Glutamine phosphoribosylpyrophosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
Amidophosphoribosyltransferase n=2 Tax=Eubacterium RepID=C4Z959_EUBR3
amidophosphoribosyltransferase
L1_007_000M1_scaffold_74_107
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

119902..121353
DNA (1452bp) protein (484aa)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
Adenylosuccinate lyase n=3 Tax=Eubacterium RepID=C4Z960_EUBR3
adenylosuccinate lyase
L1_007_000M1_scaffold_74_108
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(121478..122539)
DNA (1062bp) protein (354aa)
Predicted ATPase involved in pili biogenesis, PilT-like protein n=4 Tax=Eubacterium RepID=C4Z961_EUBR3
pilus retraction protein PilT
Predicted ATPase involved in pili biogenesis, PilT-like protein {ECO:0000313|EMBL:ACR75283.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L1_007_000M1_scaffold_74_109
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(122541..123053)
DNA (513bp) protein (171aa)
Uncharacterized protein n=2 Tax=Eubacterium RepID=R6TLX5_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK93511.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L1_007_000M1_scaffold_74_110
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(123050..123517)
DNA (468bp) protein (156aa)
Putative uncharacterized protein n=2 Tax=Eubacterium rectale RepID=C4Z963_EUBR3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR75285.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L1_007_000M1_scaffold_74_111
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(123613..124095)
DNA (483bp) protein (161aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E3U5_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR75286.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L1_007_000M1_scaffold_74_112
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(124099..124419)
DNA (321bp) protein (107aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale M104/1 RepID=D4JIR1_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK93508.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L1_007_000M1_scaffold_74_113
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(124436..125461)
DNA (1026bp) protein (342aa)
Type II secretory pathway, component PulF n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E3U3_9FIRM
Type II secretory pathway, component PulF
Type II secretory pathway, component PulF {ECO:0000313|EMBL:CBK90083.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L1_007_000M1_scaffold_74_114
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(125472..126410)
DNA (939bp) protein (313aa)
Transglutaminase-like enzymes, putative cysteine proteases n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E3U2_9FIRM
Transglutaminase-like enzymes, putative cysteine proteases
Transglutaminase-like enzymes, putative cysteine proteases {ECO:0000313|EMBL:CBK90082.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L1_007_000M1_scaffold_74_115
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

126488..126718
DNA (231bp) protein (77aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4Z968_EUBR3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR75290.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L1_007_000M1_scaffold_74_116
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

126820..127059
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Eubacterium rectale CAG:36 RepID=R6T9G3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC68865.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
hypothetical protein
L1_007_000M1_scaffold_74_117
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

127152..129302
DNA (2151bp) protein (717aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
Ribonuclease R n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4Z970_EUBR3
ribonuclease R
L1_007_000M1_scaffold_74_118
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

129534..130001
DNA (468bp) protein (156aa)
SsrA-binding protein n=4 Tax=Eubacterium RepID=C4Z971_EUBR3
SsrA-binding protein
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L1_007_000M1_scaffold_74_119
unknown

Not on your lists

comp(131211..131342)
DNA (132bp) protein (44aa)

This feature has no annotations

Displaying items 91-119 of 119 in total

View Taxonomy