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L1_007_000M1_scaffold_256

Search features with annotation key words

Displaying items 1-30 of 75 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_256_1
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(389..1132)
-----------------
DNA (744bp)
protein (248aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZAL9_EUBR3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR74080.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L1_007_000M1_scaffold_256_2
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1080..1442)
-----------------
DNA (363bp)
protein (121aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZAL8_EUBR3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR74079.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L1_007_000M1_scaffold_256_3
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1599..2018)
-----------------
DNA (420bp)
protein (140aa)
Predicted DNA-binding protein with PD1-like DNA-binding motif n=2 Tax=Eubacterium rectale RepID=D4JGT8_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR74078.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L1_007_000M1_scaffold_256_4
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2053..2433)
-----------------
DNA (381bp)
protein (127aa)
Glyoxalase I (Glyoxalase family) n=1 Tax=Eubacterium rectale CAG:36 RepID=R6TKC6_9FIRM
Glyoxalase I (Glyoxalase family) {ECO:0000313|EMBL:CDC72705.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
glyoxalase I (glyoxalase family)
L1_007_000M1_scaffold_256_5
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2493..3575)
-----------------
DNA (1083bp)
protein (361aa)
Cellulase M and related proteins n=1 Tax=Eubacterium rectale M104/1 RepID=D4JGT6_9FIRM
Cellulase M and related proteins
Cellulase M and related proteins {ECO:0000313|EMBL:CBK92570.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L1_007_000M1_scaffold_256_6
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3947..4618
-----------------
DNA (672bp)
protein (224aa)
N-(5'-phosphoribosyl)anthranilate isomerase {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123216}; Short=PRAI {ECO:0000256|HAMAP-Rule:MF_00135};; EC=5.3.1.24 {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123176};; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
Phosphoribosylanthranilate isomerase (EC:5.3.1.24)
N-(5'-phosphoribosyl)anthranilate isomerase n=1 Tax=Eubacterium rectale CAG:36 RepID=R6T9X8_9FIRM
L1_007_000M1_scaffold_256_7
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4695..5261)
-----------------
DNA (567bp)
protein (189aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6DZR0_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK92073.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L1_007_000M1_scaffold_256_8
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5625..6215)
-----------------
DNA (591bp)
protein (197aa)
Uncharacterized protein n=3 Tax=Bacteria RepID=R6TME3_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR74066.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L1_007_000M1_scaffold_256_9
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6323..8302)
-----------------
DNA (1980bp)
protein (660aa)
ATP-dependent DNA helicase, RecQ family (EC:3.6.1.-)
ATP-dependent DNA helicase, RecQ family {ECO:0000313|EMBL:CBK92071.1}; EC=3.6.1.- {ECO:0000313|EMBL:CBK92071.1};; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
ATP-dependent DNA helicase, RecQ family n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6DZQ8_9FIRM
L1_007_000M1_scaffold_256_10
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8299..10437)
-----------------
DNA (2139bp)
protein (713aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZAK3_EUBR3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR74064.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L1_007_000M1_scaffold_256_11
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10438..12135)
-----------------
DNA (1698bp)
protein (566aa)
ATPase like protein n=5 Tax=Bacteria RepID=S6CPC7_9BACT
Protein of unknown function (DUF1703)./Predicted AAA-ATPase.
Uncharacterized protein {ECO:0000313|EMBL:ACR74063.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L1_007_000M1_scaffold_256_12
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12290..13237)
-----------------
DNA (948bp)
protein (316aa)
Sugar kinases, ribokinase family (EC:2.7.1.4)
Sugar kinases ribokinase family n=1 Tax=Eubacterium rectale CAG:36 RepID=R6UE15_9FIRM
Sugar kinases ribokinase family {ECO:0000313|EMBL:CDC69002.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
L1_007_000M1_scaffold_256_13
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13347..14813)
-----------------
DNA (1467bp)
protein (489aa)
sucrose-6-phosphate hydrolase (EC:3.2.1.26)
Sucrose-6-phosphate hydrolase n=1 Tax=Eubacterium rectale CAG:36 RepID=R6TMD6_9FIRM
Sucrose-6-phosphate hydrolase {ECO:0000313|EMBL:CDC69001.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
L1_007_000M1_scaffold_256_14

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comp(14869..16563)
-----------------
DNA (1695bp)
protein (565aa)
ABC transporter substrate binding protein n=1 Tax=uncultured bacterium RepID=S6CP58_9BACT
ABC transporter substrate binding protein {ECO:0000313|EMBL:CCG34931.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-)
L1_007_000M1_scaffold_256_15
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16578..17480)
-----------------
DNA (903bp)
protein (301aa)
ABC transporter, permease protein n=5 Tax=Bacteria RepID=C4ZAJ8_EUBR3
carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-)
ABC transporter, permease protein {ECO:0000313|EMBL:ACR74059.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L1_007_000M1_scaffold_256_16
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17493..18176)
-----------------
DNA (684bp)
protein (228aa)
ABC transporter, permease protein n=2 Tax=Eubacterium rectale RepID=C4ZAJ7_EUBR3
ABC transporter permease
Carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-) {ECO:0000313|EMBL:CBK92064.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L1_007_000M1_scaffold_256_17
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18181..18408)
-----------------
DNA (228bp)
protein (76aa)
Carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-) n=2 Tax=Eubacterium RepID=D4JGS6_9FIRM
carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-)
Carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-) {ECO:0000313|EMBL:CBK92560.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L1_007_000M1_scaffold_256_18
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18644..19669
-----------------
DNA (1026bp)
protein (342aa)
Uncharacterized protein n=1 Tax=Eubacterium rectale CAG:36 RepID=R6UE03_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC68997.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
transcriptional regulator, LacI family
L1_007_000M1_scaffold_256_19
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19697..21316)
-----------------
DNA (1620bp)
protein (540aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZAJ5_EUBR3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR74056.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L1_007_000M1_scaffold_256_20
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21400..22743)
-----------------
DNA (1344bp)
protein (448aa)
Putative efflux protein, MATE family n=1 Tax=Eubacterium rectale M104/1 RepID=D4JGS3_9FIRM
putative efflux protein, MATE family
Putative efflux protein, MATE family {ECO:0000313|EMBL:CBK92557.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L1_007_000M1_scaffold_256_21
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22933..24099)
-----------------
DNA (1167bp)
protein (389aa)
Predicted permease n=1 Tax=Eubacterium rectale CAG:36 RepID=R6TH30_9FIRM
Predicted permease {ECO:0000313|EMBL:CDC68994.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
Predicted permease
L1_007_000M1_scaffold_256_22
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24160..25164)
-----------------
DNA (1005bp)
protein (335aa)
Catabolite control protein A n=4 Tax=Eubacterium RepID=C4ZAJ2_EUBR3
Transcriptional regulators
Catabolite control protein A {ECO:0000313|EMBL:ACR74053.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L1_007_000M1_scaffold_256_23
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25346..26257)
-----------------
DNA (912bp)
protein (304aa)
Carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-) n=2 Tax=Eubacterium rectale RepID=D4JGS0_9FIRM
carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-)
Carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-) {ECO:0000313|EMBL:CBK92554.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L1_007_000M1_scaffold_256_24
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26257..27066)
-----------------
DNA (810bp)
protein (270aa)
Permease of ABC transporter possibly for oligosaccharides n=4 Tax=Eubacterium RepID=C4ZAJ0_EUBR3
permease of ABC transporter possibly for oligosaccharides
Permease of ABC transporter possibly for oligosaccharides {ECO:0000313|EMBL:ACR74051.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L1_007_000M1_scaffold_256_25
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27202..28590)
-----------------
DNA (1389bp)
protein (463aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale M104/1 RepID=D4JGR8_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK92552.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L1_007_000M1_scaffold_256_26
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28839..29141)
-----------------
DNA (303bp)
protein (101aa)
Predicted O-methyltransferase n=4 Tax=Eubacterium RepID=C4ZAI8_EUBR3
Predicted endonuclease containing a URI domain
Predicted O-methyltransferase {ECO:0000313|EMBL:ACR74049.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L1_007_000M1_scaffold_256_27
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29254..29391)
-----------------
DNA (138bp)
protein (46aa)
Putative regulatory components of sensory transduction system n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZAI7_EUBR3
putative regulatory components of sensory transduction system
Putative regulatory components of sensory transduction system {ECO:0000313|EMBL:ACR74048.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L1_007_000M1_scaffold_256_28
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29401..30078)
-----------------
DNA (678bp)
protein (226aa)
Membrane-bound metallopeptidase n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6DZP1_9FIRM
Membrane-bound metallopeptidase
Membrane-bound metallopeptidase {ECO:0000313|EMBL:CBK92054.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L1_007_000M1_scaffold_256_29
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(30153..31019)
-----------------
DNA (867bp)
protein (289aa)
dimethyladenosine transferase (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethylase {ECO:0000256|HAMAP-Rule:MF_00607}; S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
Ribosomal RNA small subunit methyltransferase A n=3 Tax=Eubacterium RepID=D6DZP0_9FIRM
L1_007_000M1_scaffold_256_30
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31446..32225)
-----------------
DNA (780bp)
protein (260aa)
hydrolase, TatD family (EC:3.1.21.-)
Hydrolase, TatD family {ECO:0000313|EMBL:CBK92548.1}; EC=3.1.21.- {ECO:0000313|EMBL:CBK92548.1};; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
Hydrolase, TatD family n=1 Tax=Eubacterium rectale M104/1 RepID=D4JGR4_9FIRM
Displaying items 1-30 of 75 in total

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