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L1_007_000M1_scaffold_262

Search features with annotation key words

Displaying items 1-30 of 65 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_262_1
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..444)
DNA (444bp) protein (148aa)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WT49_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX72738.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
Site-specific recombinases, DNA invertase Pin homologs
L1_007_000M1_scaffold_262_2
Clostridium sp. CAG:411, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(429..548)
DNA (120bp) protein (40aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:411 RepID=R7I278_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE44607.1}; TaxID=1262802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:411.;"
L1_007_000M1_scaffold_262_3
Clostridium sp. CAG:167, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(676..975)
DNA (300bp) protein (100aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=R5VHU6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ90248.1}; TaxID=1262777 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:167.;"
hypothetical protein
L1_007_000M1_scaffold_262_4
Clostridium sp. CAG:167, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1002..1340)
DNA (339bp) protein (113aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=R5VHU6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ90248.1}; TaxID=1262777 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:167.;"
hypothetical protein
L1_007_000M1_scaffold_262_5
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1366..1587)
DNA (222bp) protein (74aa)
Phage portal protein, HK97 family n=1 Tax=Ruminococcus torques ATCC 27756 RepID=A5KJS1_9FIRM
Phage portal protein, HK97 family {ECO:0000313|EMBL:EDK25574.1}; TaxID=411460 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques ATCC 27756.;"
phage portal protein, HK97 family
L1_007_000M1_scaffold_262_6
Peptoniphilus lacrimalis, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1661..2149)
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:349 RepID=R6WDV4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF33236.1}; TaxID=1401070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus lacrimalis DNF00528.;"
L1_007_000M1_scaffold_262_7
[Bacteroides] pectinophilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2282..2695)
DNA (414bp) protein (138aa)
Putative uncharacterized protein n=1 Tax=[Bacteroides] pectinophilus ATCC 43243 RepID=B7AT37_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:EEC56821.1}; TaxID=483218 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="[Bacteroides] pectinophilus ATCC 43243.;"
putative terminase large subunit 2
L1_007_000M1_scaffold_262_8
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3411..3902)
DNA (492bp) protein (164aa)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WSA7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX73517.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
Site-specific recombinases, DNA invertase Pin homologs
L1_007_000M1_scaffold_262_9
Butyrivibrio crossotus, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3951..4943)
DNA (993bp) protein (331aa)
Uncharacterized protein n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=D4S0Z8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFF68104.1}; TaxID=511680 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio crossotus DSM 2876.;"
ORF6N domain.
L1_007_000M1_scaffold_262_10
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4943..5308)
DNA (366bp) protein (122aa)
DNA-binding helix-turn-helix protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FPE4_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EEG95517.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
Helix-turn-helix.
L1_007_000M1_scaffold_262_11
Lachnospiraceae oral taxon 107, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5876..6052)
DNA (177bp) protein (59aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae oral taxon 107 str. F0167 RepID=F3AZ47_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG92764.1}; TaxID=575593 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae oral taxon 107 str. F0167.;"
L1_007_000M1_scaffold_262_12
Lachnospiraceae oral taxon 107, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6067..6546)
DNA (480bp) protein (160aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae oral taxon 107 str. F0167 RepID=F3AZ45_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG92762.1}; TaxID=575593 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae oral taxon 107 str. F0167.;"
L1_007_000M1_scaffold_262_13
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6712..7374)
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8BND6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD15966.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
L1_007_000M1_scaffold_262_14
Clostridium tyrobutyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7567..8187)
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Clostridium sp. DL-VIII RepID=G7M7H7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDL91189.1}; TaxID=1408889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tyrobutyricum DIVETGP.;"
L1_007_000M1_scaffold_262_15
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8203..9879)
DNA (1677bp) protein (559aa)
23S rRNA m(5)U-1939 methyltransferase (EC:2.1.1.-)
23S rRNA m(5)U-1939 methyltransferase {ECO:0000313|EMBL:CBK91337.1}; EC=2.1.1.- {ECO:0000313|EMBL:CBK91337.1};; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
23S rRNA m(5)U-1939 methyltransferase n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E0G6_9FIRM
L1_007_000M1_scaffold_262_16
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9998..10312)
DNA (315bp) protein (105aa)
Uncharacterized protein n=3 Tax=Eubacterium RepID=R6UFK5_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK93707.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L1_007_000M1_scaffold_262_17
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10413..12704)
DNA (2292bp) protein (764aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
Superfamily I DNA and RNA helicases (EC:3.6.1.-)
Superfamily I DNA and RNA helicases n=1 Tax=Eubacterium rectale M104/1 RepID=D4JJB1_9FIRM
L1_007_000M1_scaffold_262_18
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12878..13531
DNA (654bp) protein (218aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale M104/1 RepID=D4JJB2_9FIRM
Domain of unknown function (DUF1836).
Uncharacterized protein {ECO:0000313|EMBL:CBK93709.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L1_007_000M1_scaffold_262_19
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13563..13868)
DNA (306bp) protein (102aa)
TrpR-related protein YerC/YecD n=4 Tax=Eubacterium RepID=D4JJB3_9FIRM
TrpR-related protein YerC/YecD
Uncharacterized protein {ECO:0000313|EMBL:CDC69534.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
L1_007_000M1_scaffold_262_20
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14013..14867
DNA (855bp) protein (285aa)
CAAX amino terminal protease family n=1 Tax=Eubacterium rectale M104/1 RepID=D4JJB4_9FIRM
CAAX amino terminal protease family.
CAAX amino terminal protease family {ECO:0000313|EMBL:CBK93711.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L1_007_000M1_scaffold_262_21
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14854..15321)
DNA (468bp) protein (156aa)
Predicted membrane protein n=3 Tax=Eubacterium RepID=D4JJB5_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDC69530.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
L1_007_000M1_scaffold_262_22
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15315..16373)
DNA (1059bp) protein (353aa)
histidinol-phosphate aminotransferase (EC:2.6.1.9)
Histidinol-phosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01023, ECO:0000313|EMBL:CBK93713.1}; EC=2.6.1.9 {ECO:0000256|HAMAP-Rule:MF_01023, ECO:0000313|EMBL:CBK93713.1};; Imidazole acetol-phosphate transaminase {ECO:0000256|HAMAP-Rule:MF_01023}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
Histidinol-phosphate aminotransferase n=1 Tax=Eubacterium rectale M104/1 RepID=D4JJB6_9FIRM
L1_007_000M1_scaffold_262_23
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16622..17992
DNA (1371bp) protein (457aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4Z8R8_EUBR3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR75149.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L1_007_000M1_scaffold_262_24
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18318..19871)
DNA (1554bp) protein (518aa)
UTP-hexose-1-phosphate uridylyltransferase (EC:2.7.7.10)
Galactose-1-phosphate uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571}; Short=Gal-1-P uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571};; EC=2.7.7.12 {ECO:0000256|HAMAP-Rule:MF_00571};; UDP-glucose--hexose-1-phosphate uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
Galactose-1-phosphate uridylyltransferase n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E0F7_9FIRM
L1_007_000M1_scaffold_262_25
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19921..21090)
DNA (1170bp) protein (390aa)
Galactokinase {ECO:0000256|HAMAP-Rule:MF_00246, ECO:0000256|SAAS:SAAS00025843}; EC=2.7.1.6 {ECO:0000256|HAMAP-Rule:MF_00246, ECO:0000256|SAAS:SAAS00015833};; Galactose kinase {ECO:0000256|HAMAP-Rule:MF_00246}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
Galactokinase n=3 Tax=Eubacterium RepID=C4Z8R6_EUBR3
galactokinase
L1_007_000M1_scaffold_262_26
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21258..22367)
DNA (1110bp) protein (370aa)
Arabinogalactan endo-beta-1,4-galactanase {ECO:0000256|RuleBase:RU361192}; EC=3.2.1.89 {ECO:0000256|RuleBase:RU361192};; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
Glycosyl hydrolase, family 53 n=2 Tax=Eubacterium rectale RepID=C4Z8R5_EUBR3
glycosyl hydrolase, family 53
L1_007_000M1_scaffold_262_27
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22475..25558)
DNA (3084bp) protein (1028aa)
Beta-galactosidase {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613}; EC=3.2.1.23 {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613};; Lactase {ECO:0000256|RuleBase:RU361154}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
Beta-galactosidase/beta-glucuronidase (EC:3.2.1.23)
Beta-galactosidase/beta-glucuronidase n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E0F4_9FIRM
L1_007_000M1_scaffold_262_28
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25690..26520)
DNA (831bp) protein (277aa)
Lactose transport system (Permease) n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4Z8R3_EUBR3
lactose transport system (permease)
Lactose transport system (Permease) {ECO:0000313|EMBL:ACR75144.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L1_007_000M1_scaffold_262_29
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26513..27415)
DNA (903bp) protein (301aa)
Lactose transport system (Permease) n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4Z8R2_EUBR3
lactose transport system (permease)
Lactose transport system (Permease) {ECO:0000313|EMBL:ACR75143.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L1_007_000M1_scaffold_262_30
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27502..28851)
DNA (1350bp) protein (450aa)
Putative sugar ABC transporter, periplasmic binding protein n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4Z8R1_EUBR3
putative sugar ABC transporter, periplasmic binding protein
Putative sugar ABC transporter, periplasmic binding protein {ECO:0000313|EMBL:ACR75142.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
Displaying items 1-30 of 65 in total

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