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L1_007_000M1_scaffold_347

Search features with annotation key words

Displaying items 1-30 of 165 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_347_1
Firmicutes bacterium CAG:194, Firmicutes, Bacteria

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comp(486..950)
DNA (465bp) protein (155aa)
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase YrbI family n=1 Tax=Firmicutes bacterium CAG:194 RepID=R5QT19_9FIRM
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase YrbI family {ECO:0000313|EMBL:CCZ29504.1}; TaxID=1263008 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:194.;"
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase
L1_007_000M1_scaffold_347_2
unknown

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comp(964..1590)
DNA (627bp) protein (209aa)

This feature has no annotations

L1_007_000M1_scaffold_347_3
Bacteroides salanitronis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2249..3841)
DNA (1593bp) protein (531aa)
Pyruvate carboxyltransferase n=1 Tax=Bacteroides salanitronis (strain DSM 18170 / JCM 13567 / BL78) RepID=F0R4J7_BACSH
pyruvate carboxyltransferase
Pyruvate carboxyltransferase {ECO:0000313|EMBL:ADY34687.1}; TaxID=667015 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides salanitronis (strain DSM 18170 / JCM 13567 / BL78).;"
L1_007_000M1_scaffold_347_4
Bacteroides salanitronis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3862..4506)
DNA (645bp) protein (215aa)
Acylneuraminate cytidylyltransferase n=1 Tax=Bacteroides salanitronis (strain DSM 18170 / JCM 13567 / BL78) RepID=F0R4J8_BACSH
acylneuraminate cytidylyltransferase
Acylneuraminate cytidylyltransferase {ECO:0000313|EMBL:ADY34688.1}; TaxID=667015 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides salanitronis (strain DSM 18170 / JCM 13567 / BL78).;"
L1_007_000M1_scaffold_347_5
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4578..4772)
DNA (195bp) protein (65aa)
CMP-N-acetylneuraminic acid synthetase n=1 Tax=Eubacterium rectale M104/1 RepID=D4JH37_9FIRM
CMP-N-acetylneuraminic acid synthetase
CMP-N-acetylneuraminic acid synthetase {ECO:0000313|EMBL:CBK92671.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L1_007_000M1_scaffold_347_6
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(4809..6197)
DNA (1389bp) protein (463aa)
Polysaccharide biosynthesis protein n=2 Tax=Clostridium RepID=D4CFH5_9CLOT
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:EJX40569.1}; TaxID=1134839 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium R501.;"
cpsK; repeat unit transporter (flippase)
L1_007_000M1_scaffold_347_7
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6227..7306)
DNA (1080bp) protein (360aa)
Uncharacterized protein n=1 Tax=Eubacterium rectale CAG:36 RepID=R6TDG5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC71458.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
hypothetical protein
L1_007_000M1_scaffold_347_8
Roseburia sp. CAG:303, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7340..7765)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:303 RepID=R7IX07_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE56101.1}; TaxID=1262944 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:303.;"
L1_007_000M1_scaffold_347_9
Roseburia sp. CAG:303, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7828..8382)
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:303 RepID=R7IX07_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE56101.1}; TaxID=1262944 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:303.;"
acyltransferase
L1_007_000M1_scaffold_347_10
Roseburia sp. CAG:303, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8379..8864)
DNA (486bp) protein (162aa)
Serine acetyltransferase (EC:2.3.1.30)
Cps25L n=1 Tax=Roseburia sp. CAG:303 RepID=R7IXJ3_9FIRM
Cps25L {ECO:0000313|EMBL:CDE56103.1}; TaxID=1262944 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:303.;"
L1_007_000M1_scaffold_347_11
Roseburia sp. CAG:303, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8866..9915)
DNA (1050bp) protein (350aa)
Glycosyltransferases involved in cell wall biogenesis n=1 Tax=Roseburia sp. CAG:303 RepID=R7IWY1_9FIRM
Glycosyltransferases involved in cell wall biogenesis {ECO:0000313|EMBL:CDE56105.1}; TaxID=1262944 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:303.;"
glycosyltransferase like 2 family protein
L1_007_000M1_scaffold_347_12
Roseburia sp. CAG:303, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9899..11110)
DNA (1212bp) protein (404aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:303 RepID=R7IZR0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE56107.1}; TaxID=1262944 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:303.;"
hypothetical protein
L1_007_000M1_scaffold_347_13
Roseburia sp. CAG:303, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11145..12284)
DNA (1140bp) protein (380aa)
Putative glycosyl transferase group 1 n=1 Tax=Roseburia sp. CAG:303 RepID=R7IWV3_9FIRM
Putative glycosyl transferase group 1 {ECO:0000313|EMBL:CDE56109.1}; TaxID=1262944 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:303.;"
group 1 glycosyl transferase
L1_007_000M1_scaffold_347_14
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12347..13408)
DNA (1062bp) protein (354aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K8F2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN41039.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
glycosyl transferase family protein
L1_007_000M1_scaffold_347_15
Coprococcus eutactus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13405..13614)
DNA (210bp) protein (70aa)
Glycosyltransferase, group 1 family protein {ECO:0000313|EMBL:EDP27055.1}; EC=2.4.-.- {ECO:0000313|EMBL:EDP27055.1};; TaxID=411474 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus eutactus ATCC 27759.;"
Glycosyltransferase n=1 Tax=Ruminococcus torques L2-14 RepID=D4M5E5_9FIRM
Glycosyltransferase
L1_007_000M1_scaffold_347_16
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13798..15246)
DNA (1449bp) protein (483aa)
exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase (EC:2.7.8.6)
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase n=1 Tax=Eubacterium rectale CAG:36 RepID=R6TGU7_9FIRM
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase {ECO:0000313|EMBL:CDC71475.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
L1_007_000M1_scaffold_347_17
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15531..17129)
DNA (1599bp) protein (533aa)
Coproporphyrinogen III oxidase and related Fe-S oxidoreductases {ECO:0000313|EMBL:CBK90013.1}; EC=1.3.99.22 {ECO:0000313|EMBL:CBK90013.1};; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
Coproporphyrinogen III oxidase and related Fe-S oxidoreductases (EC:1.3.99.22)
Coproporphyrinogen III oxidase and related Fe-S oxidoreductases n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E3M3_9FIRM
L1_007_000M1_scaffold_347_18
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17126..17755)
DNA (630bp) protein (210aa)
Zn-dependent hydrolases including glyoxylases n=1 Tax=Eubacterium rectale CAG:36 RepID=R6TGV8_9FIRM
Zn-dependent hydrolases including glyoxylases {ECO:0000313|EMBL:CDC71485.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
hydroxyacylglutathione hydrolase
L1_007_000M1_scaffold_347_19
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17811..20162)
DNA (2352bp) protein (784aa)
(P)ppGpp synthetase I, SpoT/RelA n=2 Tax=Eubacterium RepID=C4ZI23_EUBR3
(p)ppGpp synthetase I, SpoT/RelA
(P)ppGpp synthetase I, SpoT/RelA {ECO:0000313|EMBL:ACR76660.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L1_007_000M1_scaffold_347_20
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20238..21182)
DNA (945bp) protein (315aa)
Transcriptional regulator/sugar kinase n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZI24_EUBR3
transcriptional regulator/sugar kinase
Transcriptional regulator/sugar kinase {ECO:0000313|EMBL:ACR76661.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L1_007_000M1_scaffold_347_21
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21242..22282)
DNA (1041bp) protein (347aa)
Acetyltransferases, including N-acetylases of ribosomal proteins n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E3M0_9FIRM
Acetyltransferases, including N-acetylases of ribosomal proteins
Acetyltransferases, including N-acetylases of ribosomal proteins {ECO:0000313|EMBL:CBK90010.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L1_007_000M1_scaffold_347_22
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22282..22803)
DNA (522bp) protein (174aa)
Peptidyl-prolyl cis-trans isomerase (rotamase)-cyclophilin family (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493, ECO:0000313|EMBL:CBK93146.1};; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
Peptidyl-prolyl cis-trans isomerase n=4 Tax=Eubacterium RepID=C4ZI27_EUBR3
L1_007_000M1_scaffold_347_23
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22909..24303)
DNA (1395bp) protein (465aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase (EC:6.3.2.10)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136, ECO:0000313|EMBL:CBK90008.1};; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E3L8_9FIRM
L1_007_000M1_scaffold_347_24
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24305..25360)
DNA (1056bp) protein (352aa)
D-alanine--D-alanine ligase (EC:6.3.2.4)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000256|HAMAP-Rule:MF_00047}; D-alanylalanine synthetase {ECO:0000256|HAMAP-Rule:MF_00047}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
D-alanine--D-alanine ligase n=2 Tax=Eubacterium rectale RepID=C4ZI29_EUBR3
L1_007_000M1_scaffold_347_25
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25533..25790)
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Eubacterium rectale CAG:36 RepID=R6UL88_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC71522.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
hypothetical protein
L1_007_000M1_scaffold_347_26
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26224..26751)
DNA (528bp) protein (176aa)
Ribosome-associated protein Y (PSrp-1) n=4 Tax=Eubacterium RepID=C4ZI34_EUBR3
SSU ribosomal protein S30P/sigma 54 modulation protein
SSU ribosomal protein S30P/sigma 54 modulation protein {ECO:0000313|EMBL:CBK93150.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L1_007_000M1_scaffold_347_27
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27035..29083)
DNA (2049bp) protein (683aa)
ABC transporter, ATP-binding protein n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZI35_EUBR3
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ACR76672.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
ABC transporter ATP-binding protein
L1_007_000M1_scaffold_347_28
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29114..30418)
DNA (1305bp) protein (435aa)
ATPase with chaperone activity, ATP-binding domain, diverged n=2 Tax=Eubacterium rectale RepID=C4ZI36_EUBR3
ATPase with chaperone activity, ATP-binding domain, diverged
ATPase with chaperone activity, ATP-binding domain, diverged {ECO:0000313|EMBL:ACR76673.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L1_007_000M1_scaffold_347_29
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30537..31859)
DNA (1323bp) protein (441aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
Putative uncharacterized protein n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZI37_EUBR3
hypothetical protein
L1_007_000M1_scaffold_347_30
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31905..32573)
DNA (669bp) protein (223aa)
DNA-binding response regulator, OmpR family (Rec-wHTH domains) n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZI38_EUBR3
DNA-binding response regulator, OmpR family (Rec-wHTH domains)
DNA-binding response regulator, OmpR family (Rec-wHTH domains) {ECO:0000313|EMBL:ACR76675.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
Displaying items 1-30 of 165 in total

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