ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

L1_007_000M1_scaffold_2366

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_2366_1
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(207..1889)
DNA (1683bp) protein (561aa)
ABC-type oligopeptide transport system, periplasmic component n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6DY98_9FIRM
ABC-type oligopeptide transport system, periplasmic component
ABC-type oligopeptide transport system, periplasmic component {ECO:0000313|EMBL:CBK91036.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L1_007_000M1_scaffold_2366_2
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1981..2973)
DNA (993bp) protein (331aa)
Oligopeptide/dipeptide ABC transporter, ATPase subunit n=3 Tax=Eubacterium RepID=C4ZGE5_EUBR3
oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain
Oligopeptide/dipeptide ABC transporter, ATPase subunit {ECO:0000313|EMBL:ACR74742.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L1_007_000M1_scaffold_2366_3
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2966..3970)
DNA (1005bp) protein (335aa)
Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain n=2 Tax=Eubacterium rectale RepID=D6DY96_9FIRM
oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain
Uncharacterized protein {ECO:0000313|EMBL:ACR74741.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L1_007_000M1_scaffold_2366_4
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3986..5044)
DNA (1059bp) protein (353aa)
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6DY95_9FIRM
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components {ECO:0000313|EMBL:CBK91033.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L1_007_000M1_scaffold_2366_5
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5057..5968)
DNA (912bp) protein (304aa)
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components n=4 Tax=Eubacterium RepID=D4JK86_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDC70988.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
L1_007_000M1_scaffold_2366_6
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6434..6769
DNA (336bp) protein (112aa)
Putative uncharacterized protein n=3 Tax=Eubacterium rectale RepID=C4ZGE0_EUBR3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR74737.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L1_007_000M1_scaffold_2366_7
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6962..8002)
DNA (1041bp) protein (347aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZGD9_EUBR3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR74736.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L1_007_000M1_scaffold_2366_8
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8315..9262)
DNA (948bp) protein (316aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
Signal transduction histidine kinase n=1 Tax=Eubacterium rectale CAG:36 RepID=R6TSV1_9FIRM
Signal transduction histidine kinase
L1_007_000M1_scaffold_2366_9
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9287..10189)
DNA (903bp) protein (301aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZGD6_EUBR3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR74733.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L1_007_000M1_scaffold_2366_10
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10182..10910)
DNA (729bp) protein (243aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZGD5_EUBR3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR74732.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L1_007_000M1_scaffold_2366_11
[Eubacterium] eligens, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10849..12603)
DNA (1755bp) protein (585aa)
Site-specific DNA recombinase n=1 Tax=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) RepID=C4Z5S3_EUBE2
site-specific DNA recombinase
Site-specific DNA recombinase {ECO:0000313|EMBL:ACR73051.1}; TaxID=515620 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium eligens (strain ATCC 27750 / VPI C15-48).;"
L1_007_000M1_scaffold_2366_12
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12841..13755)
DNA (915bp) protein (305aa)
LysM domain./Uncharacterized protein conserved in bacteria (DUF2272) n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6DZC3_9FIRM
LysM domain./Uncharacterized protein conserved in bacteria (DUF2272).
LysM domain./Uncharacterized protein conserved in bacteria (DUF2272) {ECO:0000313|EMBL:CBK91936.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
Displaying 12 items

View Taxonomy