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L1_007_000M1_scaffold_4546

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_4546_1
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(134..898)
DNA (765bp) protein (255aa)
Transposase IS116/IS110/IS902 family protein n=2 Tax=Clostridium botulinum RepID=M1ZUF9_CLOBO
Transposase
Transposase {ECO:0000313|EMBL:CCO04316.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_4546_2
Ruminococcus sp. CAG:579, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1342..1947)
DNA (606bp) protein (202aa)
Transcriptional regulator XRE family n=1 Tax=Ruminococcus sp. CAG:579 RepID=R6CMP7_9FIRM
Transcriptional regulator XRE family {ECO:0000313|EMBL:CDA72801.1}; TaxID=1262963 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:579.;"
hypothetical protein
L1_007_000M1_scaffold_4546_3
Ruminococcus sp. CAG:579, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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2080..2349
DNA (270bp) protein (90aa)
Cupin 2 conserved barrel domain protein n=1 Tax=Ruminococcus sp. CAG:579 RepID=R6CCI4_9FIRM
Cupin 2 conserved barrel domain protein {ECO:0000313|EMBL:CDA74338.1}; TaxID=1262963 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:579.;"
L1_007_000M1_scaffold_4546_4
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2342..4156
DNA (1815bp) protein (605aa)
Mu transposase n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2DKS5_9CLOT
Mu transposase {ECO:0000313|EMBL:ERI80266.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
A; MU-like transposase
L1_007_000M1_scaffold_4546_5
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4160..4501
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2C6Y5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI80265.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
transcriptional regulator
L1_007_000M1_scaffold_4546_6
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4631..5059
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2C6Y5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI80265.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
muB; DNA transposition protein gpB
L1_007_000M1_scaffold_4546_7
unknown

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5312..5923
DNA (612bp) protein (204aa)

This feature has no annotations

L1_007_000M1_scaffold_4546_8
Ruminococcus sp. CAG:579, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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6028..6357
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:579 RepID=R6CNA9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA74334.1}; TaxID=1262963 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:579.;"
L1_007_000M1_scaffold_4546_9
Ruminococcus sp. CAG:579, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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6361..6795
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:579 RepID=R6CCH7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA74333.1}; TaxID=1262963 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:579.;"
L1_007_000M1_scaffold_4546_10
Ruminococcus sp. CAG:579, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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6808..7803
DNA (996bp) protein (332aa)
Gp7 n=1 Tax=Ruminococcus sp. CAG:579 RepID=R6D907_9FIRM
Gp7 {ECO:0000313|EMBL:CDA74332.1}; TaxID=1262963 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:579.;"
Gp7
L1_007_000M1_scaffold_4546_11
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8271..8564)
DNA (294bp) protein (98aa)
Transposase IS116/IS110/IS902 family protein n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6LZA4_CLOB8
Transposase
Transposase {ECO:0000313|EMBL:CCO04316.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Displaying 11 items

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