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L1_007_000M1_scaffold_1036

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_1036_1
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(41..784)
DNA (744bp) protein (248aa)
MutG family lantibiotic protection ABC transporter permease subunit n=2 Tax=root RepID=C6JCE2_9FIRM
hypothetical protein
MutG family lantibiotic protection ABC transporter permease subunit {ECO:0000313|EMBL:EES77436.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L1_007_000M1_scaffold_1036_2
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(787..1533)
DNA (747bp) protein (249aa)
MutE/EpiE family lantibiotic protection ABC transporter permease subunit n=3 Tax=root RepID=C6JCE1_9FIRM
Putative mutacin ABC transporter protein, MutE {ECO:0000313|EMBL:EKY23184.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
hypothetical protein
L1_007_000M1_scaffold_1036_3
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1534..2289)
DNA (756bp) protein (252aa)
Mutacin ABC transporter, ATP-binding protein MutF n=1 Tax=Anaerostipes hadrus DSM 3319 RepID=L1Q5C7_9FIRM
ABC-type multidrug transport system, ATPase component
Mutacin ABC transporter, ATP-binding protein MutF {ECO:0000313|EMBL:EKY23183.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
L1_007_000M1_scaffold_1036_4
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2375..2593)
DNA (219bp) protein (73aa)
Putative TetR family transcriptional regulator n=1 Tax=Clostridium sp. CAG:352 RepID=R6QTX2_9CLOT
Putative TetR family transcriptional regulator {ECO:0000313|EMBL:CDC40033.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
putative TetR family transcriptional regulator
L1_007_000M1_scaffold_1036_5
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3169..4335
DNA (1167bp) protein (389aa)
Beta-lactamase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TDH1_9FIRM
putative Beta-lactamase
Putative Beta-lactamase {ECO:0000313|EMBL:CCO06143.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_1036_6
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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4354..5790
DNA (1437bp) protein (479aa)
Hydrophobic domain protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T2R5_9FIRM
Hydrophobic domain protein {ECO:0000313|EMBL:CDC67738.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein
L1_007_000M1_scaffold_1036_7
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5875..6129
DNA (255bp) protein (85aa)
Preprotein translocase SecG subunit n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6UAB0_9FIRM
secG; preprotein translocase, SecG subunit
Preprotein translocase SecG subunit {ECO:0000313|EMBL:CDC67737.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L1_007_000M1_scaffold_1036_8
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6200..8311
DNA (2112bp) protein (704aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
rnr; ribonuclease R (EC: (EC:3.1.-.-)
Ribonuclease R n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T6A5_9FIRM
L1_007_000M1_scaffold_1036_9
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8597..11008)
DNA (2412bp) protein (804aa)
Glycogen/starch phosphorylase {ECO:0000313|EMBL:CCO06148.1}; EC=2.4.1.1 {ECO:0000313|EMBL:CCO06148.1};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
glgP; Glycogen/starch phosphorylase (EC:2.4.1.1)
Phosphorylase glycogen/starch/alpha-glucan family n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TDG7_9FIRM
L1_007_000M1_scaffold_1036_10
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11580..12455)
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T2R0_9FIRM
putative membrane protein
Putative membrane protein {ECO:0000313|EMBL:CCO06149.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_1036_11
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12501..13394)
DNA (894bp) protein (298aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6UAA7_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO06150.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_1036_12
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13489..14589)
DNA (1101bp) protein (367aa)
FemAB family protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TIP2_9FIRM
hypothetical protein
FemAB family protein {ECO:0000313|EMBL:CDC67731.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L1_007_000M1_scaffold_1036_13
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15418..16956)
DNA (1539bp) protein (513aa)
Ferredoxin hydrogenase, large subunit {ECO:0000313|EMBL:CCO06153.1}; EC=1.12.7.2 {ECO:0000313|EMBL:CCO06153.1};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
ferredoxin hydrogenase, large subunit (EC:1.12.7.2)
4Fe-4S binding domain protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T6A0_9FIRM
L1_007_000M1_scaffold_1036_14
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17374..17838
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TDG2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC67729.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein predicted by Glimmer/Critica
L1_007_000M1_scaffold_1036_15
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17835..19079
DNA (1245bp) protein (415aa)
Phage terminase large subunit PBSX family n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T2Q4_9FIRM
phage terminase large subunit
Phage terminase large subunit {ECO:0000313|EMBL:CCO06155.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_1036_16
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19113..20279
DNA (1167bp) protein (389aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6UAA4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC67727.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein predicted by Glimmer/Critica
L1_007_000M1_scaffold_1036_17
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20276..21112
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TIN5_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO06157.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_1036_18
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21290..22264
DNA (975bp) protein (325aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T694_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO06158.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_1036_19
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22327..22707
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TDF7_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CDC67724.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L1_007_000M1_scaffold_1036_20
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22723..23145
DNA (423bp) protein (141aa)
Conserved domain protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T2P6_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO06160.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_1036_21
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23138..23482
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6UAA1_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO06161.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_1036_22
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23482..24390
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TIN0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC67721.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein predicted by Glimmer/Critica
L1_007_000M1_scaffold_1036_23
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24465..25346)
DNA (882bp) protein (294aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T688_9FIRM
sugar transport system permease protein
Sugar transport system permease protein {ECO:0000313|EMBL:CCO06163.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_1036_24
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25353..26282)
DNA (930bp) protein (310aa)
ABC transporter permease protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TDF2_9FIRM
sugar transport system permease protein
Sugar transport system permease protein {ECO:0000313|EMBL:CCO06164.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_1036_25
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26377..27891)
DNA (1515bp) protein (505aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T2P1_9FIRM
ABC transporter extracellular-binding protein {ECO:0000313|EMBL:CCO06165.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
ABC transporter extracellular-binding protein
L1_007_000M1_scaffold_1036_26
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27970..28980)
DNA (1011bp) protein (337aa)
Transcriptional regulator LacI family n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6UA98_9FIRM
Transcriptional regulator, LacI family
Transcriptional regulator LacI family {ECO:0000313|EMBL:CDC67717.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
Displaying 26 items

View Taxonomy