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L1_007_000M1_scaffold_70

Search features with annotation key words

Displaying items 1-30 of 129 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_70_1
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(427..1092)
DNA (666bp) protein (222aa)
HAD hydrolase family IA variant 3 n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T1U5_9FIRM
HAD hydrolase family IA variant 3 {ECO:0000313|EMBL:CDC67418.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
conserved hypothetical protein
L1_007_000M1_scaffold_70_2
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1101..2201)
DNA (1101bp) protein (367aa)
rRNA (Guanine-N(2)-)-methyltransferase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TCI8_9FIRM
rRNA (Guanine-N(2)-)-methyltransferase {ECO:0000313|EMBL:CDC67419.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
conserved hypothetical protein
L1_007_000M1_scaffold_70_3
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2269..4491)
DNA (2223bp) protein (741aa)
pbp1A; Putative bifunctional transglycosylase/transpeptidase penicillin-binding protein (Glycosyltransferase Family 51 protein ) (EC:2.4.1.-)
Putative bifunctional transglycosylase/transpeptidase penicillin-binding protein (Glycosyltransferase Family 51 protein ) {ECO:0000313|EMBL:CCO04758.1}; EC=2.4.1.- {ECO:0000313|EMBL:CCO04758.1};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Transglycosylase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T5B3_9FIRM
L1_007_000M1_scaffold_70_4
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4671..6629)
DNA (1959bp) protein (653aa)
ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC:1.17.1.2)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|SAAS:SAAS00096570, ECO:0000313|EMBL:CCO04757.1}; EC=1.17.1.2 {ECO:0000256|SAAS:SAAS00096570, ECO:0000313|EMBL:CCO04757.1};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6THT9_9FIRM
L1_007_000M1_scaffold_70_5
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6630..7961)
DNA (1332bp) protein (444aa)
(d)CMP kinase {ECO:0000256|SAAS:SAAS00249031}; EC=2.7.4.25 {ECO:0000256|SAAS:SAAS00249031};; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
Cytidylate kinase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U9E7_9FIRM
cytidylate kinase
L1_007_000M1_scaffold_70_6
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7974..9209)
DNA (1236bp) protein (412aa)
Flavoprotein family protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T1V0_9FIRM
Flavoprotein family protein {ECO:0000313|EMBL:CDC67423.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
conserved hypothetical protein
L1_007_000M1_scaffold_70_7
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9206..10078)
DNA (873bp) protein (291aa)
SIS domain protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TCJ4_9FIRM
Transcriptional regulator, RpiR family
Transcriptional regulator, RpiR family {ECO:0000313|EMBL:CCO04753.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_70_8
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10135..10350)
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T5B8_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO04752.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_70_9
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10352..11293)
DNA (942bp) protein (314aa)
Metallo-beta-lactamase domain protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6THU4_9FIRM
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO04751.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_70_10
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11314..13905)
DNA (2592bp) protein (864aa)
Cell division protein FtsK/SpoIIIE n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U9F3_9FIRM
Cell division protein FtsK/SpoIIIE {ECO:0000313|EMBL:CDC67427.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
ftsK; DNA translocase FtsK
L1_007_000M1_scaffold_70_11
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14041..14907)
DNA (867bp) protein (289aa)
uppP; undecaprenyl-diphosphatase (EC:3.6.1.27)
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006, ECO:0000313|EMBL:CCO04749.1}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006, ECO:0000313|EMBL:CCO04749.1};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphate phosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Undecaprenyl-diphosphatase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T1V5_9FIRM
L1_007_000M1_scaffold_70_12
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14935..15069)
DNA (135bp) protein (45aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TCJ9_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO04748.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_70_13
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15041..15775)
DNA (735bp) protein (245aa)
ATP-dependent Clp endopeptidase proteolytic subunit ClpP n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T5C2_9FIRM
hypothetical protein
ATP-dependent Clp endopeptidase proteolytic subunit ClpP {ECO:0000313|EMBL:CDC67430.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L1_007_000M1_scaffold_70_14
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15978..17096)
DNA (1119bp) protein (373aa)
Conserved domain protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6THV0_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO04746.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_70_15
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17369..18661
DNA (1293bp) protein (431aa)
purA; Adenylosuccinate synthase (EC:6.3.4.4)
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.4 {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520};; IMP--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00011}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Adenylosuccinate synthetase n=1 Tax=Ruminococcus albus 8 RepID=E9SG43_RUMAL
L1_007_000M1_scaffold_70_16
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18842..19729)
DNA (888bp) protein (296aa)
DNA protecting protein DprA n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U9F8_9FIRM
dprA; DNA protecting protein DprA
DNA protecting protein DprA {ECO:0000313|EMBL:CCO04744.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_70_17
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19905..22622
DNA (2718bp) protein (906aa)
Agu2A n=1 Tax=Ruminococcus albus 8 RepID=F6LP89_RUMAL
Glycoside Hydrolase Family 2 protein
Glycoside Hydrolase Family 2 protein {ECO:0000313|EMBL:CCO04743.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_70_18
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22815..23828
DNA (1014bp) protein (338aa)
Putative lipoprotein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TCK4_9FIRM
vanY; putative D-alanyl-D-alanine carboxypeptidase
Putative D-alanyl-D-alanine carboxypeptidase {ECO:0000313|EMBL:CCO04742.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_70_19
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23848..24681
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T5C7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC67435.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein
L1_007_000M1_scaffold_70_20
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24957..26075)
DNA (1119bp) protein (373aa)
Methionine synthase vitamin-B12 independent n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6THV6_9FIRM
Methionine synthase vitamin-B12 independent {ECO:0000313|EMBL:CDC67436.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein
L1_007_000M1_scaffold_70_21
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26305..26898
DNA (594bp) protein (198aa)
PetM family of cytochrome b6f complex subunit 7 n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U9G4_9FIRM
PetM family of cytochrome b6f complex subunit 7 {ECO:0000313|EMBL:CDC67437.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein
L1_007_000M1_scaffold_70_22
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27097..27216
DNA (120bp) protein (40aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T1W9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC67438.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L1_007_000M1_scaffold_70_23
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27355..28425
DNA (1071bp) protein (357aa)
Conserved domain protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TCL0_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO04738.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_70_24
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28415..28858)
DNA (444bp) protein (148aa)
Acetyltransferase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T5D1_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO04737.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_70_25
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29001..30029
DNA (1029bp) protein (343aa)
DnaD domain protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6THW0_9FIRM
DnaD domain protein {ECO:0000313|EMBL:CDC67441.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
DnaD domain protein
L1_007_000M1_scaffold_70_26
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30043..31023
DNA (981bp) protein (327aa)
DNA replication protein DnaC n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U9G9_9FIRM
DNA replication protein DnaC {ECO:0000313|EMBL:CDC67442.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein
L1_007_000M1_scaffold_70_27
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31034..32362
DNA (1329bp) protein (443aa)
Putative serine esterase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T1X6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO04734.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_70_28
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32573..32923)
DNA (351bp) protein (117aa)
Hpt domain n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TCL7_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO04733.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_70_29
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32954..34894)
DNA (1941bp) protein (647aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T5D6_9FIRM
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO04732.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_70_30
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35063..38311)
DNA (3249bp) protein (1083aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
ATP-dependent exonuclase V beta subunit helicase and exonuclease domain-containing n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6THW3_9FIRM
hypothetical protein
Displaying items 1-30 of 129 in total

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