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L1_007_000M1_scaffold_87

Search features with annotation key words

Displaying items 1-30 of 98 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_87_1
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..823
DNA (822bp) protein (274aa)
Putative carbohydrate-active enzyme n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6THH8_9FIRM
Putative carbohydrate-active enzyme {ECO:0000313|EMBL:CDC67326.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
Glycoside Hydrolase Family 5 protein
L1_007_000M1_scaffold_87_2
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(952..2715)
DNA (1764bp) protein (588aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T529_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO03821.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_87_3
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2717..4279)
DNA (1563bp) protein (521aa)
conserved hypothetical protein (EC:1.4.99.1)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TC97_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC67324.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L1_007_000M1_scaffold_87_4
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4297..4758)
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T1I1_9FIRM
putative membrane protein
Putative membrane protein {ECO:0000313|EMBL:CCO03819.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_87_5
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5179..7053)
DNA (1875bp) protein (625aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U935_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCO03818.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
conserved hypothetical protein
L1_007_000M1_scaffold_87_6
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7202..7900)
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6THH2_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO03817.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_87_7
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8698..10008
DNA (1311bp) protein (437aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T524_9FIRM
putative secreted protein
Putative secreted protein {ECO:0000313|EMBL:CCO03816.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_87_8
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10327..12735)
DNA (2409bp) protein (803aa)
Glycoside Hydrolase Family 94 protein. Formerly known as glycosyltransferase family GT36 (EC:2.4.1.-)
Glycoside Hydrolase Family 94 protein. Formerly known as glycosyltransferase family GT36 {ECO:0000313|EMBL:CCO03814.1}; EC=2.4.1.- {ECO:0000313|EMBL:CCO03814.1};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Putative carbohydrate-active enzyme n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T1H6_9FIRM
L1_007_000M1_scaffold_87_9
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13079..14014
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6THP6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC67386.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein predicted by Glimmer/Critica
L1_007_000M1_scaffold_87_10
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14079..14360)
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T578_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO03811.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_87_11
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14594..16099)
DNA (1506bp) protein (502aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TCF1_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO03809.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_87_12
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16119..17843)
DNA (1725bp) protein (575aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T1Q5_9FIRM
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO03808.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_87_13
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17859..18563)
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U9A6_9FIRM
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDC67382.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L1_007_000M1_scaffold_87_14
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18563..19540)
DNA (978bp) protein (326aa)
ABC transporter ATPase component (EC:3.6.3.-)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6THN8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC67381.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L1_007_000M1_scaffold_87_15
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19824..21272)
DNA (1449bp) protein (483aa)
gltX; Glutamyl-tRNA synthetase (EC:6.1.1.17)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
Glutamate--tRNA ligase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T573_9FIRM
L1_007_000M1_scaffold_87_16
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21360..21839)
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TCE7_9FIRM
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO03804.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_87_17
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21836..22765)
DNA (930bp) protein (310aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
ribF; Riboflavin kinase / FMN adenylyltransferase (EC:2.7.7.2)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T1P9_9FIRM
L1_007_000M1_scaffold_87_18
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22792..23706)
DNA (915bp) protein (305aa)
truB; tRNA pseudouridine synthase B (EC:5.4.99.12)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000313|EMBL:CCO03802.1}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
tRNA pseudouridine synthase B n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U999_9FIRM
L1_007_000M1_scaffold_87_19
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23706..24653)
DNA (948bp) protein (316aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6THN1_9FIRM
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO03801.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_87_20
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24672..25028)
DNA (357bp) protein (119aa)
Ribosome-binding factor A n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T568_9FIRM
rbfA; Ribosome-binding factor A
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000256|SAAS:SAAS00023386}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_87_21
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25118..27664)
DNA (2547bp) protein (849aa)
Translation initiation factor IF-2 n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TCE4_9FIRM
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
infB; Translation initiation factor IF-2
L1_007_000M1_scaffold_87_22
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27699..28031)
DNA (333bp) protein (111aa)
Ribosomal protein L7Ae n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T1P4_9FIRM
conserved hypothetical protein
Ribosomal protein L7Ae {ECO:0000313|EMBL:CDC67373.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L1_007_000M1_scaffold_87_23
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28024..28296)
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U993_9FIRM
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO03797.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_87_24
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28283..29413)
DNA (1131bp) protein (377aa)
NusA antitermination factor n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6THM7_9FIRM
nusA; Transcription termination factor NusA
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_87_25
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29433..29927)
DNA (495bp) protein (165aa)
Ribosome maturation factor RimP n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T563_9FIRM
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
conserved hypothetical protein
L1_007_000M1_scaffold_87_26
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30143..30541)
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TCD9_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO03794.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_87_27
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30581..31498)
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T1N7_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO03793.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_87_28
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31621..32256)
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U988_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC67367.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein predicted by Glimmer/Critica
L1_007_000M1_scaffold_87_29
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32301..33521
DNA (1221bp) protein (407aa)
alr; Alanine racemase (EC:5.1.1.1)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000313|EMBL:CCO03791.1}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000313|EMBL:CCO03791.1};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Alanine racemase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6THM0_9FIRM
L1_007_000M1_scaffold_87_30
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33538..34815
DNA (1278bp) protein (426aa)
Amidohydrolase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T559_9FIRM
Amidohydrolase {ECO:0000313|EMBL:CDC67365.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
conserved hypothetical protein
Displaying items 1-30 of 98 in total

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