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L1_007_000M1_scaffold_476

Search features with annotation key words

Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_476_1
unknown

Not on your lists

2..94
DNA (93bp) protein (31aa)

This feature has no annotations

L1_007_000M1_scaffold_476_2
[Clostridium] clariflavum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

276..1790
DNA (1515bp) protein (505aa)
Tetratricopeptide repeat protein n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8LVX4_CLOCD
tetratricopeptide repeat protein
Tetratricopeptide repeat protein {ECO:0000313|EMBL:AEV67541.1}; TaxID=720554 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45).;"
L1_007_000M1_scaffold_476_3
Ruminococcus flavefaciens, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1780..2100
DNA (321bp) protein (107aa)
hypothetical protein n=1 Tax=Ruminococcus flavefaciens RepID=UPI00030AFC3E
Uncharacterized protein {ECO:0000313|EMBL:EWM52148.1}; TaxID=1341157 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus flavefaciens 007c.;"
hypothetical protein
L1_007_000M1_scaffold_476_4
Ruminiclostridium thermocellum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2116..2454
DNA (339bp) protein (113aa)
Uncharacterized protein n=7 Tax=Clostridium thermocellum RepID=E6UR99_CLOTL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABN53189.1}; TaxID=203119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium thermocellum (strain ATCC 27405 / DSM 1237 / NBRC 103400 /; NCIMB 10682 / NRRL B-4536 / VPI 7372) (Ruminiclostridium; thermocellum).;"
L1_007_000M1_scaffold_476_5
Ruminococcus flavefaciens, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2472..2771
DNA (300bp) protein (100aa)
hypothetical protein n=1 Tax=Ruminococcus flavefaciens RepID=UPI0002F9A53E
Uncharacterized protein {ECO:0000313|EMBL:EWM52150.1}; TaxID=1341157 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus flavefaciens 007c.;"
hypothetical protein
L1_007_000M1_scaffold_476_6
Ruminiclostridium thermocellum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2851..4179
DNA (1329bp) protein (443aa)
Uncharacterized protein n=7 Tax=Clostridium thermocellum RepID=E6UR97_CLOTL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABN53187.1}; TaxID=203119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium thermocellum (strain ATCC 27405 / DSM 1237 / NBRC 103400 /; NCIMB 10682 / NRRL B-4536 / VPI 7372) (Ruminiclostridium; thermocellum).;"
L1_007_000M1_scaffold_476_7
Ruminococcus flavefaciens, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4176..7430
DNA (3255bp) protein (1085aa)
DNA segregation ATPase, FtsK/SpoIIIE family n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8LVX9_CLOCD
Uncharacterized protein {ECO:0000313|EMBL:EWM52152.1}; TaxID=1341157 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus flavefaciens 007c.;"
DNA segregation ATPase FtsK
L1_007_000M1_scaffold_476_8
Ruminococcus flavefaciens, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7427..9160
DNA (1734bp) protein (578aa)
hypothetical protein n=1 Tax=Ruminococcus flavefaciens RepID=UPI0003126257
Uncharacterized protein {ECO:0000313|EMBL:EWM52153.1}; TaxID=1341157 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus flavefaciens 007c.;"
DNA segregation ATPase FtsK
L1_007_000M1_scaffold_476_9
[Clostridium] clariflavum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9175..9498
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8LVY1_CLOCD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV67548.1}; TaxID=720554 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45).;"
L1_007_000M1_scaffold_476_10
unknown

Not on your lists

9502..9669
DNA (168bp) protein (56aa)

This feature has no annotations

L1_007_000M1_scaffold_476_11
Ruminococcus flavefaciens, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9698..10915
DNA (1218bp) protein (406aa)
hypothetical protein, partial n=1 Tax=Ruminococcus flavefaciens RepID=UPI00036D75FA
Uncharacterized protein {ECO:0000313|EMBL:EWM52141.1}; TaxID=1341157 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus flavefaciens 007c.;"
Hedgehog/intein hint domain-containing protein
L1_007_000M1_scaffold_476_12
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10863..11414
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SWM2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC65558.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein
L1_007_000M1_scaffold_476_13
unknown

Not on your lists

11609..12088
DNA (480bp) protein (160aa)

This feature has no annotations

L1_007_000M1_scaffold_476_14
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12130..13200
DNA (1071bp) protein (357aa)
Putative uncharacterized protein n=1 Tax=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) RepID=A3DH02_CLOTH
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO04627.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_476_15
unknown

Not on your lists

13176..13274
DNA (99bp) protein (33aa)

This feature has no annotations

L1_007_000M1_scaffold_476_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13225..13677
DNA (453bp) protein (151aa)
Uncharacterized protein n=3 Tax=Firmicutes RepID=E4LPZ6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EQJ58656.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L1_007_000M1_scaffold_476_17
Ruminococcus flavefaciens, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13852..15723
DNA (1872bp) protein (624aa)
hypothetical protein n=1 Tax=Ruminococcus flavefaciens RepID=UPI0002E10E90
Uncharacterized protein {ECO:0000313|EMBL:EWM52156.1}; TaxID=1341157 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus flavefaciens 007c.;"
Serine/threonine-protein kinase-like domain
L1_007_000M1_scaffold_476_18
Ruminococcus flavefaciens, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15720..16070
DNA (351bp) protein (117aa)
hypothetical protein n=1 Tax=Ruminococcus flavefaciens RepID=UPI0002DA32E7
Uncharacterized protein {ECO:0000313|EMBL:EWM52157.1}; TaxID=1341157 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus flavefaciens 007c.;"
hypothetical protein
L1_007_000M1_scaffold_476_19
[Clostridium] clariflavum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16073..16453
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8LVV7_CLOCD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV67524.1}; Flags: Precursor;; TaxID=720554 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45).;"
L1_007_000M1_scaffold_476_20
[Clostridium] clariflavum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16450..22386
DNA (5937bp) protein (1979aa)
Uncharacterized protein n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8LVV8_CLOCD
Uncharacterized protein {ECO:0000313|EMBL:AEV67525.1}; Flags: Precursor;; TaxID=720554 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45).;"
hypothetical protein
L1_007_000M1_scaffold_476_21
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22594..23028
DNA (435bp) protein (145aa)
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U8V7_9FIRM
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:CDC67237.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein
L1_007_000M1_scaffold_476_22
Ruminococcus sp. CAG:579, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23485..23706
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:579 RepID=R6CFE0_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CDA74370.1}; TaxID=1262963 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:579.;"
L1_007_000M1_scaffold_476_23
Ruminococcus sp. CAG:579, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23700..24044
DNA (345bp) protein (115aa)
mRNA interferase {ECO:0000256|PIRNR:PIRNR033490}; EC=3.1.-.- {ECO:0000256|PIRNR:PIRNR033490};; TaxID=1262963 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:579.;"
mazF; Toxin MazF (EC:3.1.-.-)
mRNA interferase n=1 Tax=Ruminococcus sp. CAG:579 RepID=R6CS71_9FIRM
L1_007_000M1_scaffold_476_24
Ruminococcus sp. CAG:579, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24037..24195
DNA (159bp) protein (53aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:579 RepID=R6CSE8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA74436.1}; TaxID=1262963 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:579.;"
hypothetical protein predicted by Glimmer/Critica
L1_007_000M1_scaffold_476_25
Ruminococcus sp. CAG:579, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24397..25938
DNA (1542bp) protein (514aa)
Resolvase n-terminal:recombinase putative n=1 Tax=Ruminococcus sp. CAG:579 RepID=R6CNE8_9FIRM
hypothetical protein
Resolvase n-terminal:recombinase putative {ECO:0000313|EMBL:CDA74374.1}; TaxID=1262963 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:579.;"
L1_007_000M1_scaffold_476_26
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25935..26960
DNA (1026bp) protein (342aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:579 RepID=R6CFE5_9FIRM
Putative recombinase
Putative recombinase {ECO:0000313|EMBL:CCO03958.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_476_27
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26908..28524
DNA (1617bp) protein (539aa)
Resolvase domain n=1 Tax=Ruminococcus sp. CAG:579 RepID=R6CS76_9FIRM
Putative recombinase
Putative recombinase {ECO:0000313|EMBL:CCO03957.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_476_28
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28604..28966)
DNA (363bp) protein (121aa)
Toxin-antitoxin system toxin component RelE family n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6RHL6_9FIRM
Toxin-antitoxin system toxin component RelE family {ECO:0000313|EMBL:CDC47280.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
Plasmid stabilization system protein
L1_007_000M1_scaffold_476_29
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28963..29211)
DNA (249bp) protein (83aa)
Prevent-host-death family protein n=3 Tax=Eubacterium RepID=D4MKC0_9FIRM
prevent-host-death family protein
Prevent-host-death family protein {ECO:0000313|EMBL:CBL34203.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
L1_007_000M1_scaffold_476_30
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29315..30418
DNA (1104bp) protein (368aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T2U9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC67773.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
conserved hypothetical protein
Displaying items 1-30 of 48 in total

View Taxonomy