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L1_007_000M1_scaffold_488

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Displaying items 1-30 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_488_1
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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196..1329
DNA (1134bp) protein (378aa)
23S rRNA m(2)A-2503 methyltransferase (EC:2.1.1.-)
Putative 23S rRNA m2A2503 methyltransferase n=1 Tax=Ruminococcus albus 8 RepID=E9S782_RUMAL
Putative 23S rRNA m2A2503 methyltransferase {ECO:0000313|EMBL:EGC04860.1}; TaxID=246199 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus albus 8.;"
L1_007_000M1_scaffold_488_2
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1568..2344
DNA (777bp) protein (259aa)
Histidinol phosphate phosphatase HisJ family n=1 Tax=Ruminococcus albus 8 RepID=E9S783_RUMAL
Histidinol phosphate phosphatase HisJ family {ECO:0000313|EMBL:EGC04862.1}; TaxID=246199 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus albus 8.;"
HisJ family histidinol phosphate phosphatase
L1_007_000M1_scaffold_488_3
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2373..2876
DNA (504bp) protein (168aa)
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EGC04861.1}; EC=2.4.-.- {ECO:0000313|EMBL:EGC04861.1};; TaxID=246199 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus albus 8.;"
Glycosyltransferase, group 2 family protein n=1 Tax=Ruminococcus albus 8 RepID=E9S784_RUMAL
glycosyltransferase, family 2
L1_007_000M1_scaffold_488_4
Methanosarcina horonobensis, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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2906..3265
DNA (360bp) protein (120aa)
ABC transporter, ATP-binding protein n=3 Tax=Erysipelotrichaceae RepID=B0N7Y9_9FIRM
Putrescine transport ATP-binding protein PotA {ECO:0000313|EMBL:AKB77483.1}; TaxID=1434110 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina horonobensis HB-1 = JCM 15518.;"
Molybdenum transport ATP-binding protein ModC
L1_007_000M1_scaffold_488_5
Ruminococcus sp. CAG:254, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3612..4655)
DNA (1044bp) protein (348aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:254 RepID=R5V5E3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ83354.1}; TaxID=1262953 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:254.;"
conserved hypothetical protein
L1_007_000M1_scaffold_488_6
Ruminococcus sp. CAG:254, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4667..4921)
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:254 RepID=R5UZ93_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ83355.1}; TaxID=1262953 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:254.;"
hypothetical protein
L1_007_000M1_scaffold_488_7
Desulfotomaculum hydrothermale, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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5112..6287
DNA (1176bp) protein (392aa)
NADH-dependent butanol dehydrogenase A {ECO:0000313|EMBL:CCO06870.1}; EC=1.1.1.- {ECO:0000313|EMBL:CCO06870.1};; TaxID=1121428 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum hydrothermale Lam5 = DSM 18033.;"
Alcohol dehydrogenase (NADP(+)) (EC:1.1.1.2)
NADH-dependent butanol dehydrogenase A n=1 Tax=Desulfotomaculum hydrothermale Lam5 = DSM 18033 RepID=K8DWX2_9FIRM
L1_007_000M1_scaffold_488_8
Ruminococcus sp. CAG:254, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6543..6725)
DNA (183bp) protein (61aa)
hypothetical protein n=1 Tax=Ruminococcus flavefaciens RepID=UPI0001C376CA
Uncharacterized protein {ECO:0000313|EMBL:CCZ83357.1}; TaxID=1262953 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:254.;"
L1_007_000M1_scaffold_488_9
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6725..7132)
DNA (408bp) protein (136aa)
hypothetical protein n=1 Tax=Ruminococcus flavefaciens RepID=UPI0001C376C9
Uncharacterized protein {ECO:0000313|EMBL:EGC01991.1}; TaxID=246199 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus albus 8.;"
hypothetical protein
L1_007_000M1_scaffold_488_10
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7137..7841)
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Ruminococcus albus 8 RepID=E9SFD8_RUMAL
Uncharacterized protein {ECO:0000313|EMBL:EGC02002.1}; TaxID=246199 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus albus 8.;"
L1_007_000M1_scaffold_488_11
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7843..8790)
DNA (948bp) protein (316aa)
ParB-like protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T242_9FIRM
ParB-like protein {ECO:0000313|EMBL:CDC67493.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
chromosome partitioning protein ParB
L1_007_000M1_scaffold_488_12
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8787..9131)
DNA (345bp) protein (115aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=E9SG09_RUMAL
Uncharacterized protein {ECO:0000313|EMBL:CDC67494.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L1_007_000M1_scaffold_488_13
Ruminococcus sp. CAG:254, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9128..9358)
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:254 RepID=R5VS39_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ83362.1}; TaxID=1262953 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:254.;"
hypothetical protein
L1_007_000M1_scaffold_488_14
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9352..10134)
DNA (783bp) protein (261aa)
Putative sporulation initiation inhibitor protein Soj n=1 Tax=Ruminococcus albus 8 RepID=E9SG11_RUMAL
Putative sporulation initiation inhibitor protein Soj {ECO:0000313|EMBL:EGC01736.1}; TaxID=246199 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus albus 8.;"
ATPases involved in chromosome partitioning
L1_007_000M1_scaffold_488_15
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10160..10546)
DNA (387bp) protein (129aa)
single-stranded DNA-binding protein n=1 Tax=Ruminococcus flavefaciens RepID=UPI0001C376C3
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=246199 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus albus 8.;"
single-strand binding protein
L1_007_000M1_scaffold_488_16
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10816..11223
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Ruminococcus albus 8 RepID=E9SG13_RUMAL
Uncharacterized protein {ECO:0000313|EMBL:EGC01838.1}; TaxID=246199 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus albus 8.;"
hypothetical protein predicted by Glimmer/Critica
L1_007_000M1_scaffold_488_17
[Bacteroides] pectinophilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11225..11701
DNA (477bp) protein (159aa)
Putative uncharacterized protein n=1 Tax=[Bacteroides] pectinophilus ATCC 43243 RepID=B7AQ28_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:EEC57800.1}; TaxID=483218 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="[Bacteroides] pectinophilus ATCC 43243.;"
hypothetical protein
L1_007_000M1_scaffold_488_18
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11702..13105)
DNA (1404bp) protein (468aa)
Relaxase/mobilization nuclease family protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T5M6_9FIRM
Relaxase/mobilization nuclease family protein {ECO:0000313|EMBL:CDC67500.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
Relaxase/mobilization nuclease family protein
L1_007_000M1_scaffold_488_19
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13054..13398)
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TI54_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC67501.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
Bacterial mobilisation protein (MobC).
L1_007_000M1_scaffold_488_20
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13794..14480
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U9R4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC67502.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein
L1_007_000M1_scaffold_488_21
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14616..14810
DNA (195bp) protein (65aa)
Conserved domain protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T281_9FIRM
Conserved domain protein {ECO:0000313|EMBL:CDC67503.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein
L1_007_000M1_scaffold_488_22
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14921..15457
DNA (537bp) protein (179aa)
DNA polymerase III, alpha subunit (gram-positive type) (EC:2.7.7.7)
exonuclease n=1 Tax=Ruminococcus flavefaciens RepID=UPI0001C375BE
DNA polymerase III alpha subunit (Gram-positive type) {ECO:0000313|EMBL:CDC67504.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L1_007_000M1_scaffold_488_23
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15490..15960)
DNA (471bp) protein (157aa)
Conserved domain protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T5P0_9FIRM
Conserved domain protein {ECO:0000313|EMBL:CDC67505.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein
L1_007_000M1_scaffold_488_24
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16082..16273
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TI59_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC67506.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein
L1_007_000M1_scaffold_488_25
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16897..17577
DNA (681bp) protein (227aa)
Helix-turn-helix n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U9S2_9FIRM
Helix-turn-helix {ECO:0000313|EMBL:CDC67507.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
Helix-turn-helix.
L1_007_000M1_scaffold_488_26
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17577..18008
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T286_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC67508.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein
L1_007_000M1_scaffold_488_27
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18493..19266
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TCW8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC67509.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein
L1_007_000M1_scaffold_488_28
Ruminococcus sp. CAG:624, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19534..19758
DNA (225bp) protein (75aa)
hypothetical protein n=1 Tax=Ruminococcus flavefaciens RepID=UPI0001C375B9
DNA binding domain excisionase family {ECO:0000313|EMBL:CDF00774.1}; TaxID=1262965 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:624.;"
hypothetical protein
L1_007_000M1_scaffold_488_29
Ruminococcus sp. CAG:624, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19876..21273
DNA (1398bp) protein (466aa)
hypothetical protein n=1 Tax=Ruminococcus flavefaciens RepID=UPI0001C375B8
Site-specific recombinase XerD {ECO:0000313|EMBL:CDF00775.1}; TaxID=1262965 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:624.;"
Site-specific recombinase XerD
L1_007_000M1_scaffold_488_30
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21649..23085
DNA (1437bp) protein (479aa)
Efflux transporter RND family MFP subunit n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T079_9FIRM
Efflux transporter RND family MFP subunit {ECO:0000313|EMBL:CDC66858.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
conserved hypothetical protein
Displaying items 1-30 of 53 in total

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