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L1_007_000M1_scaffold_710

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_710_1
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..382
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XG51_9FIRM
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EDN78842.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
Site-specific recombinase XerD
L1_007_000M1_scaffold_710_2
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

468..1535
DNA (1068bp) protein (356aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AZI0_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN78841.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
hypothetical protein
L1_007_000M1_scaffold_710_3
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1906..3012
DNA (1107bp) protein (369aa)
ATPase associated with various cellular activities AAA_5 n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TE71_9FIRM
ATPase associated with various cellular activities AAA_5 {ECO:0000313|EMBL:CDC66161.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein
L1_007_000M1_scaffold_710_4
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2973..5369
DNA (2397bp) protein (799aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U5R2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC66162.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein
L1_007_000M1_scaffold_710_5
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5366..6508
DNA (1143bp) protein (381aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SYA6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC66163.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein
L1_007_000M1_scaffold_710_6
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6520..8250
DNA (1731bp) protein (577aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T8X6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCO06030.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
hypothetical protein
L1_007_000M1_scaffold_710_7
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8247..11600
DNA (3354bp) protein (1118aa)
Uncharacterized protein n=1 Tax=Ruminococcus albus 8 RepID=E9SFJ1_RUMAL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO06029.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_710_8
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11646..13013)
DNA (1368bp) protein (456aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T1U4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC66170.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
conserved hypothetical protein
L1_007_000M1_scaffold_710_9
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13215..14309)
DNA (1095bp) protein (365aa)
Ribosome-binding ATPase YchF n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TE76_9FIRM
ychF; GTP-binding protein YchF
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_710_10
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14328..14585)
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U5R7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC66172.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein predicted by Glimmer/Critica
L1_007_000M1_scaffold_710_11
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14600..17407)
DNA (2808bp) protein (936aa)
Efflux ABC transporter permease protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SYB5_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO06025.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_710_12
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17430..17894)
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T8Y6_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO06024.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_710_13
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17901..19094)
DNA (1194bp) protein (398aa)
putative amino acid aminotransferase (EC:2.6.1.-)
Putative transcriptional regulator GntR family n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T1U9_9FIRM
Putative transcriptional regulator GntR family {ECO:0000313|EMBL:CDC66175.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L1_007_000M1_scaffold_710_14
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19319..21031
DNA (1713bp) protein (571aa)
Polysaccharide biosynthesis protein n=1 Tax=Ruminococcus albus 8 RepID=E9S918_RUMAL
Stage V sporulation protein B {ECO:0000313|EMBL:CCO06022.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
spoVB; Stage V sporulation protein B
L1_007_000M1_scaffold_710_15
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21090..21887
DNA (798bp) protein (266aa)
MazG family protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T1V9_9FIRM
MazG family protein {ECO:0000313|EMBL:CDC66185.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
mazG; MazG family protein
L1_007_000M1_scaffold_710_16
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21927..22202
DNA (276bp) protein (92aa)
Bacterial nucleoid protein Hbs n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U5S9_9FIRM
hip; Integration host factor, beta subunit
Integration host factor, beta subunit {ECO:0000313|EMBL:CCO06020.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_710_17
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22269..22511
DNA (243bp) protein (81aa)
RNA-binding S4 domain protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T904_9FIRM
RNA-binding S4 domain protein {ECO:0000313|EMBL:CDC66189.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hslR; hypothetical protein
L1_007_000M1_scaffold_710_18
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22564..24246)
DNA (1683bp) protein (561aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TE93_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCO06018.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
hypothetical protein predicted by Glimmer/Critica
L1_007_000M1_scaffold_710_19
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24406..25245)
DNA (840bp) protein (280aa)
pdaA; polysaccharide deacetylase family protein (EC:3.5.1.-)
Polysaccharide deacetylase family protein {ECO:0000313|EMBL:CCO06017.1}; EC=3.5.1.- {ECO:0000313|EMBL:CCO06017.1};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Putative delta-lactam-biosynthetic de-N-acetylase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TE98_9FIRM
L1_007_000M1_scaffold_710_20
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25375..25620)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U5T8_9FIRM
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO06016.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_710_21
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(25749..28163)
DNA (2415bp) protein (805aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
pheT; phenylalanyl-tRNA synthetase subunit beta (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SYD5_9FIRM
L1_007_000M1_scaffold_710_22
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28186..28776)
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T914_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC66199.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein predicted by Glimmer/Critica
L1_007_000M1_scaffold_710_23
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(28776..29795)
DNA (1020bp) protein (340aa)
pheS; phenylalanyl-tRNA synthetase subunit alpha (EC:6.1.1.20)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T1X5_9FIRM
L1_007_000M1_scaffold_710_24
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30143..30787)
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TEA2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC66201.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein predicted by Glimmer/Critica
L1_007_000M1_scaffold_710_25
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30855..31040)
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U5U2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC66202.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L1_007_000M1_scaffold_710_26
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31107..32165)
DNA (1059bp) protein (353aa)
Fibronectin type III domain n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SYE0_9FIRM
Fibronectin type III domain {ECO:0000313|EMBL:CDC66203.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein
L1_007_000M1_scaffold_710_27
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32302..33969)
DNA (1668bp) protein (556aa)
AMP-binding enzyme n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T4C2_9FIRM
AMP-binding enzyme {ECO:0000313|EMBL:CDC67015.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein
L1_007_000M1_scaffold_710_28
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33991..34722)
DNA (732bp) protein (244aa)
HAD-superfamily hydrolase subfamily IA variant 3 n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TGP8_9FIRM
HAD-superfamily hydrolase subfamily IA variant 3 {ECO:0000313|EMBL:CDC67016.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein
L1_007_000M1_scaffold_710_29
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34944..35501)
DNA (558bp) protein (186aa)
Putative manganese efflux pump MntP n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U8D8_9FIRM
hypothetical protein
Putative manganese efflux pump MntP {ECO:0000256|HAMAP-Rule:MF_01521}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Displaying 29 items

View Taxonomy