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L1_007_000M1_scaffold_2025

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Displaying 13 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_2025_1
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(179..2437)
DNA (2259bp) protein (753aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T6E0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC67775.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein predicted by Glimmer/Critica
L1_007_000M1_scaffold_2025_2
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2452..3909)
DNA (1458bp) protein (486aa)
Putative alginate O-acetyltransferase AlgI n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TIU4_9FIRM
Putative alginate O-acetyltransferase
Putative alginate O-acetyltransferase {ECO:0000313|EMBL:CCO04020.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_2025_3
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4125..4898)
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6UAF1_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDC67777.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L1_007_000M1_scaffold_2025_4
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5129..6859)
DNA (1731bp) protein (577aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
phoR; Two-component system sensor histidine kinase PhoR (EC:2.7.13.3)
PAS domain S-box protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TDK9_9FIRM
L1_007_000M1_scaffold_2025_5
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6887..7564)
DNA (678bp) protein (226aa)
Two component transcriptional regulator winged helix family n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T6E5_9FIRM
phoB; Two-component system transcriptional regulator PhoB
Two-component system transcriptional regulator PhoB {ECO:0000313|EMBL:CCO04017.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_2025_6
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7583..9364)
DNA (1782bp) protein (594aa)
Na/Pi-cotransporter n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TIU9_9FIRM
Na/Pi-cotransporter {ECO:0000313|EMBL:CDC67781.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
Putative Sodium/phosphate symporter
L1_007_000M1_scaffold_2025_7
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9524..10183)
DNA (660bp) protein (220aa)
Phosphate transport system regulatory protein PhoU n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6UAF7_9FIRM
phoU; Phosphate transport system regulator protein PhoU
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_2025_8
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10220..10975)
DNA (756bp) protein (252aa)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01702}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
pstB; Phosphate ABC transporter, ATP-binding protein (EC:3.6.3.27)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T2V9_9FIRM
L1_007_000M1_scaffold_2025_9
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10979..11824)
DNA (846bp) protein (282aa)
Phosphate ABC transporter membrane protein 2 PhoT family (TC 3.A.1.7.1) n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TDL4_9FIRM
Phosphate ABC transporter membrane protein 2 PhoT family (TC 3.A.1.7.1) {ECO:0000313|EMBL:CDC67784.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
pstA; Phosphate ABC transporter permease component PstA
L1_007_000M1_scaffold_2025_10
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11830..12810)
DNA (981bp) protein (327aa)
Phosphate ABC transporter permease protein PstC n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T6E9_9FIRM
Phosphate ABC transporter permease protein PstC {ECO:0000313|EMBL:CDC67785.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
pstC; Phosphate ABC transporter permease component PstC
L1_007_000M1_scaffold_2025_11
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12872..13825)
DNA (954bp) protein (318aa)
Putative Phosphate-binding protein PstS 2 n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TIV4_9FIRM
Putative Phosphate-binding protein PstS 2 {ECO:0000313|EMBL:CDC67786.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
pstS2; Phosphate-binding protein pstS 2
L1_007_000M1_scaffold_2025_12
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14044..15015)
DNA (972bp) protein (324aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6UAG3_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO04009.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_2025_13
unknown

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15868..15993
DNA (126bp) protein (42aa)

This feature has no annotations

Displaying 13 items

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