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L1_007_000M1_scaffold_2898

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_2898_1
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(261..2879)
DNA (2619bp) protein (873aa)
adhE; Acetaldehyde dehydrogenase / alcohol dehydrogenase (EC:1.2.1.10)
Iron-containing alcohol dehydrogenase n=1 Tax=Ruminococcus sp. CAG:579 RepID=R6CNP8_9FIRM
Aldehyde-alcohol dehydrogenase {ECO:0000256|PIRNR:PIRNR000111}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_2898_2
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3368..4126
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TA76_9FIRM
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDC66589.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L1_007_000M1_scaffold_2898_3
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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4338..4928
DNA (591bp) protein (197aa)
Putative lipoprotein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T330_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO04936.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_2898_4
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4977..5645)
DNA (669bp) protein (223aa)
Redox-sensing transcriptional repressor Rex n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TFE8_9FIRM
rex; putative redox-sensing transcriptional regulator
Redox-sensing transcriptional repressor Rex {ECO:0000256|HAMAP-Rule:MF_01131}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_2898_5
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5809..7299)
DNA (1491bp) protein (497aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U728_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC66592.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
conserved hypothetical protein
L1_007_000M1_scaffold_2898_6
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7317..8369)
DNA (1053bp) protein (351aa)
ABC-type nitrate/sulfonate/bicarbonate transport system periplasmic component n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SZJ7_9FIRM
putative ABC transporter extracellular-binding protein
Putative ABC transporter extracellular-binding protein {ECO:0000313|EMBL:CCO04948.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_2898_7
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8395..9171)
DNA (777bp) protein (259aa)
ABC-type nitrate/sulfonate/bicarbonate transport system permease component n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TA82_9FIRM
ABC transporter membrane component
ABC transporter membrane component {ECO:0000313|EMBL:CCO04949.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_2898_8
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9188..10255)
DNA (1068bp) protein (356aa)
Sulfate-transporting ATPase {ECO:0000256|SAAS:SAAS00085229}; EC=3.6.3.25 {ECO:0000256|SAAS:SAAS00085229};; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
ABC transporter ATPase component (EC:3.6.3.-)
Sulfate ABC transporter ATPase subunit n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T333_9FIRM
L1_007_000M1_scaffold_2898_9
unknown

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10427..10600
DNA (174bp) protein (58aa)

This feature has no annotations

L1_007_000M1_scaffold_2898_10
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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10629..10940
DNA (312bp) protein (104aa)
Thioredoxin n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TFF3_9FIRM
hypothetical protein
Thioredoxin {ECO:0000313|EMBL:CDC66596.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L1_007_000M1_scaffold_2898_11
unknown

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11498..11566
DNA (69bp) protein (23aa)

This feature has no annotations

Displaying 11 items

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