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L1_007_000M1_scaffold_2967

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_2967_1
Ruminococcus champanellensis, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(48..524)
DNA (477bp) protein (159aa)
hypothetical protein n=1 Tax=Ruminococcus flavefaciens RepID=UPI0001C37913
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL18026.1}; TaxID=213810 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus champanellensis (strain DSM 18848 / JCM 17042 / 18P13).;"
L1_007_000M1_scaffold_2967_2
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(524..802)
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Ruminococcus albus 8 RepID=E9SFB3_RUMAL
Uncharacterized protein {ECO:0000313|EMBL:EGC02032.1}; TaxID=246199 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus albus 8.;"
L1_007_000M1_scaffold_2967_3
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(795..1241)
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2MA12_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ96143.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
hypothetical protein
L1_007_000M1_scaffold_2967_4
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1266..2654)
DNA (1389bp) protein (463aa)
hypothetical protein n=1 Tax=Ruminococcus flavefaciens RepID=UPI0001C37917
Conserved domain protein {ECO:0000313|EMBL:EGC02305.1}; Flags: Fragment;; TaxID=246199 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus albus 8.;"
hypothetical protein
L1_007_000M1_scaffold_2967_5
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2673..2963)
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Ruminococcus albus 8 RepID=E9SEG7_RUMAL
Uncharacterized protein {ECO:0000313|EMBL:EGC02316.1}; TaxID=246199 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus albus 8.;"
L1_007_000M1_scaffold_2967_6
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3596..3871)
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TAY0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC66859.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein predicted by Glimmer/Critica
L1_007_000M1_scaffold_2967_7
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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4208..4837
DNA (630bp) protein (210aa)
Putative orotate phosphoribosyltransferase (EC:2.4.2.10)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T3S8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC66860.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L1_007_000M1_scaffold_2967_8
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4968..5519)
DNA (552bp) protein (184aa)
TIGR04002 family protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TG67_9FIRM
Putative membrane protein
TIGR04002 family protein {ECO:0000313|EMBL:CDC66861.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L1_007_000M1_scaffold_2967_9
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5817..6251)
DNA (435bp) protein (145aa)
Transcriptional regulator BadM/Rrf2 family n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U7T3_9FIRM
Putative transcriptional regulator (rrf2 family)
Putative transcriptional regulator (Rrf2 family) {ECO:0000313|EMBL:CCO03850.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_2967_10
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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6456..6962
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T086_9FIRM
conserved hypothetical protein
Cell division protein ZapA {ECO:0000256|SAAS:SAAS00072473}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_2967_11
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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6962..9034
DNA (2073bp) protein (691aa)
Putative protease (EC:3.4.-.-)
Peptidase U32 family n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TAY4_9FIRM
Peptidase U32 family {ECO:0000313|EMBL:CDC66864.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L1_007_000M1_scaffold_2967_12
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9036..9476
DNA (441bp) protein (147aa)
dut; dUTP pyrophosphatase (EC:3.6.1.23)
Deoxyuridine 5'-triphosphate nucleotidohydrolase {ECO:0000256|SAAS:SAAS00071038}; EC=3.6.1.23 {ECO:0000256|SAAS:SAAS00071036, ECO:0000313|EMBL:CCO03847.1};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
DUTP diphosphatase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T3T2_9FIRM
L1_007_000M1_scaffold_2967_13
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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9495..10643
DNA (1149bp) protein (383aa)
Putative amidohydrolase (EC:3.5.2.-)
Amidohydrolase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TG72_9FIRM
Amidohydrolase {ECO:0000313|EMBL:CDC66866.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
Displaying 13 items

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