ggKbase home page

L1_007_000M1_scaffold_70_84

Organism: dasL1_007_000M1_concoct_78_fa

near complete RP 48 / 55 MC: 2 BSCG 50 / 51 MC: 1 ASCG 14 / 38
Location: comp(96410..98314)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease J (EC:3.1.-.-) similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 634.0
  • Bit_score: 1254
  • Evalue 0.0
Ribonuclease J {ECO:0000313|EMBL:CCO04689.1}; EC=3.1.-.- {ECO:0000313|EMBL:CCO04689.1};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 634.0
  • Bit_score: 1254
  • Evalue 0.0
RNA-metabolising metallo-beta-lactamase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TBA0_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 99.7
  • Coverage: 634.0
  • Bit_score: 1250
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Ruminococcus bicirculans → Ruminococcus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1905
ATGAACGAAAAGAACAACACAGTAAAAAATCCTACACAAAAACGTTTTTTCAGAAAAAAACAGAATAAGAGCGAGATACCTCTGGCTCAGGCTTCAAAAGAGCTTGACCGTGTAAAAAGTCAGAGAGCTTCGGGCAGTGTGAAAAAAACGCTTCAGCCGAGAAATGAAACTCCACAGAGAAAACCGCAGAATACTCAGCAAAGACGTCCAAGACCTGCGGCGAACAGAGTGAAAGAGCCTGTAAGAAGAACGCCTGTGAAGATAATCCCTCTTGGCGGTCTTAACGAGATAGGCAAGAATTTCACTGTTATCGAGTGTTCAAACGATATGTTCGTTATCGACTGCGGATTGGCTTTTCCTGACAGTGAAATGCCTGGCGTTGATATCGTCATCCCTGATTTCTCATACGTCGAGAAAAATCAGGAAAAGCTCAGGGGCGTTGTGCTTACACATGGTCATGAGGATCATATAGGCGGTCTGCCGTATTTTCTGAAAAAATTCAACGTGCCTGTTTACGGCACAAGGCTTACCCTTGGTCTTGTTGAGGGCAAGCTGAAAGAGCATGGGCTTTTAGGAACTGTAAAACTCAACGTTGTAACGCCAAGACAGACAGTTAAGCTTGGCTGTATGGCGGTGGAGTTTATAAGAGTAAATCACTCTATCCCTGATGCCGTGGGAATGGCTATCCATACCCCTGCTGGTGTGCTTATCCATACTGGTGACTTCAAGGTAGACTATACACCTATCGAGGGCGGTATAATCGACCTGCCTAGATTTGCAGAGCTTGGAAACAAGGGCGTTTTGGCTCTTATGGCTGACTCTACAAACGCTGAAAGACCTGGCTATACCATGAGCGAGCGCAAGGTTGGCGAAAGCTTTGTGAAGCTTTTCAACAAGGCTGAGGGCAAGAGGATAATTATTGCCACTTTCGCTTCAAACGTTCACAGAGTTCAGCAGATAATAAATAACGCTGTCACACATGGCAGAAAAGTGGCTGTGTCAGGCAGAAGTATGGTGAATGTTATCTCAAAGGGTATCGAGCTTGGCTATCTTAAAGTGCCTGACGGTGTGCTTGTGGATATCGACACTATATCGAGATATGCACCTGAAAAAATGGTCATCGTCACAACGGGAAGTCAGGGCGAGCCTATGTCGGCGCTTACAAGAATGTCGGCAAACGAGCATAGGAACGTTACTATCACTCCTATGGACTTTATCATAATCTCGGCTAATCCTATCCCCGGCAATGAAAAGTATGTCACAAAGGTAGTAAACGACCTTATGAGATTGGGTGCAGAGGTAATATATGAGTCAATGTACGAGGTGCACGTTTCAGGACACGCTTGTCAGGAAGAGCAGAAATTGTTGCTTTCTATCACAAAGCCAAAGTTCTTTATCCCTGTACACGGTGAGTATAAACATCTTATGAAACACAGAGATACGGCACTTTCTGTGGGAATCCCTGAGAGCAATATAATCATTGCTGATATAGGCAACGTTATCGAAACAGACGGCGTTGACATGAAGATAACAGGACAAGTGCCTGCGGGCAAGGTACTTGTGGACGGTCTTGGCGTTGGCGACGTTGGCGCAATAGTTCTCCGTGACAGAAAACATCTTGCTCAGGACGGACTTATCATTGCCGTGGCAACTATCGACAGGGCTTCGGGAGATATCCTTGCAGGGCCTGACGTGGTTTCAAGAGGCTTTGTGTATGTAAGAGAGAGCGAGGAGCTTATGACCGAAGCTCAGAAGCTTCTTACCGAAACACTTCAGGATTGTCTTGACAGAAATATGAAGGATTGGAATACCATAAAGGGCAGAATGAAGGACAATCTTTCGGACTTTATCTTCACAAAGACAAAGAGAAGTCCTATGATTTTGCCGATAATAATGGAATTATGA
PROTEIN sequence
Length: 635
MNEKNNTVKNPTQKRFFRKKQNKSEIPLAQASKELDRVKSQRASGSVKKTLQPRNETPQRKPQNTQQRRPRPAANRVKEPVRRTPVKIIPLGGLNEIGKNFTVIECSNDMFVIDCGLAFPDSEMPGVDIVIPDFSYVEKNQEKLRGVVLTHGHEDHIGGLPYFLKKFNVPVYGTRLTLGLVEGKLKEHGLLGTVKLNVVTPRQTVKLGCMAVEFIRVNHSIPDAVGMAIHTPAGVLIHTGDFKVDYTPIEGGIIDLPRFAELGNKGVLALMADSTNAERPGYTMSERKVGESFVKLFNKAEGKRIIIATFASNVHRVQQIINNAVTHGRKVAVSGRSMVNVISKGIELGYLKVPDGVLVDIDTISRYAPEKMVIVTTGSQGEPMSALTRMSANEHRNVTITPMDFIIISANPIPGNEKYVTKVVNDLMRLGAEVIYESMYEVHVSGHACQEEQKLLLSITKPKFFIPVHGEYKHLMKHRDTALSVGIPESNIIIADIGNVIETDGVDMKITGQVPAGKVLVDGLGVGDVGAIVLRDRKHLAQDGLIIAVATIDRASGDILAGPDVVSRGFVYVRESEELMTEAQKLLTETLQDCLDRNMKDWNTIKGRMKDNLSDFIFTKTKRSPMILPIIMEL*