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L1_007_000M1_scaffold_4476_6

Organism: dasL1_007_000M1_concoct_78_fa

near complete RP 48 / 55 MC: 2 BSCG 50 / 51 MC: 1 ASCG 14 / 38
Location: 4534..5100

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-24 subunit ECF subfamily n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T076_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 188.0
  • Bit_score: 381
  • Evalue 2.90e-103
RNA polymerase sigma-24 subunit ECF subfamily {ECO:0000313|EMBL:CDC65625.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 188.0
  • Bit_score: 381
  • Evalue 4.10e-103
sig14; RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 97.3
  • Coverage: 188.0
  • Bit_score: 372
  • Evalue 6.50e-101

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Taxonomy

Ruminococcus sp. CAG:57 → Ruminococcus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 567
ATGGGAACAGAACTAAAAGATACATTCGTGCAGGCTTATAATGATACATACGATTATATAGACCGCTATCTTACCTCAAAGCTTCCCACCAGAGAGCTTATAGAAGACGCACTCCAAAGCGTGTATCTTGATTTTTACCGCTCCCTTATCACCACTGAGGGGAAAATAAAAAACGTCAGGCATTACGTCCTGCGTATAGCCAAGCATTATGTTGCAGACCATTACAGACAACAGCCCAAAGCCACATTCGAGGATATCACCGACCTGAATATCCCCGACGAAAAAGCCCTTGCCGACCTTGAAAGCGCCGACTTTTTCGACTATGAGCAGGTGATGAGCTATCTCAAAAGCTCCGACGATACCACCTACCGCATTTTCGTACTGCATTATCAGTACGGCTATACAATAAAGAAAACCGCATCATGCCTAGGCTTGTCCCAGTCCACCGTAAAATCAAGACTATACCGCACCCTTGACAAGCTGAAAAAAACATACTGTGAAAAGGAGGAACAAAGCAATGAAAATGACAGATATAATGAAAAAGTCCCACAGCGAAAGCAAGTCTGA
PROTEIN sequence
Length: 189
MGTELKDTFVQAYNDTYDYIDRYLTSKLPTRELIEDALQSVYLDFYRSLITTEGKIKNVRHYVLRIAKHYVADHYRQQPKATFEDITDLNIPDEKALADLESADFFDYEQVMSYLKSSDDTTYRIFVLHYQYGYTIKKTASCLGLSQSTVKSRLYRTLDKLKKTYCEKEEQSNENDRYNEKVPQRKQV*