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L1_007_000M1_scaffold_4476

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_4476_1
unknown

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comp(43..201)
DNA (159bp) protein (53aa)

This feature has no annotations

L1_007_000M1_scaffold_4476_2
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(316..1560)
DNA (1245bp) protein (415aa)
Conserved domain protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TCP5_9FIRM
Transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:CCO05141.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_4476_3
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1798..2049)
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T082_9FIRM
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDC65630.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L1_007_000M1_scaffold_4476_4
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2111..4009)
DNA (1899bp) protein (633aa)
Polysaccharide biosynthesis protein n=1 Tax=Ruminococcus albus 8 RepID=E9SAY0_RUMAL
Protein involved in exopolysaccharide synthesis {ECO:0000313|EMBL:CCO05143.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
epsM; protein involved in exopolysaccharide synthesis
L1_007_000M1_scaffold_4476_5
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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4203..4325
DNA (123bp) protein (41aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U497_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO05144.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_4476_6
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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4534..5100
DNA (567bp) protein (189aa)
RNA polymerase sigma-24 subunit ECF subfamily n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T076_9FIRM
RNA polymerase sigma-24 subunit ECF subfamily {ECO:0000313|EMBL:CDC65625.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
sig14; RNA polymerase sigma factor
L1_007_000M1_scaffold_4476_7
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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5051..6403
DNA (1353bp) protein (451aa)
Serine/threonine protein kinase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T7B8_9FIRM
Serine/threonine protein kinase {ECO:0000313|EMBL:CDC65624.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein
L1_007_000M1_scaffold_4476_8
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6442..7122)
DNA (681bp) protein (227aa)
sleB; Spore cortex-lytic enzyme (probable N-acetylmuramyl-L-alanine amidase) (EC:3.5.1.28)
Spore cortex-lytic enzyme (Probable N-acetylmuramyl-L-alanine amidase) {ECO:0000313|EMBL:CCO05148.1}; EC=3.5.1.28 {ECO:0000313|EMBL:CCO05148.1};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Putative spore cortex-lytic enzyme n=1 Tax=Ruminococcus albus 8 RepID=E9S795_RUMAL
Displaying 8 items

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