ggKbase home page

L1_007_000M1_scaffold_122

Search features with annotation key words

Displaying items 1-30 of 97 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_122_1
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

401..1567
DNA (1167bp) protein (389aa)
Uncharacterized protein n=1 Tax=Akkermansia sp. CAG:344 RepID=R7DXM4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD95349.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
hypothetical protein
L1_007_000M1_scaffold_122_2
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

2159..2752
DNA (594bp) protein (198aa)
Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Akkermansia sp. CAG:344 RepID=R7DXM5_9BACT
Sigma 54 modulation protein/ribosomal protein S30EA {ECO:0000313|EMBL:CDD94753.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
sigma 54 modulation protein/ribosomal protein S30EA
L1_007_000M1_scaffold_122_3
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

2968..3096
DNA (129bp) protein (43aa)
Uncharacterized protein n=3 Tax=Akkermansia RepID=B2UQU1_AKKM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDD94752.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
L1_007_000M1_scaffold_122_4
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(3317..4018)
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Akkermansia sp. CAG:344 RepID=R7DXB9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD94751.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
hypothetical protein
L1_007_000M1_scaffold_122_5
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

4151..5761
DNA (1611bp) protein (537aa)
ABC transporter related n=1 Tax=Akkermansia sp. CAG:344 RepID=R7DW02_9BACT
ABC transporter related {ECO:0000313|EMBL:CDD94749.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
ABC transporter
L1_007_000M1_scaffold_122_6
Akkermansia muciniphila, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

5820..6350
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Akkermansia muciniphila (strain ATCC BAA-835) RepID=B2UQT8_AKKM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD04823.1}; Flags: Precursor;; TaxID=349741 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia.;" source="Akkermansia muciniphila (strain ATCC BAA-835 / Muc).;"
L1_007_000M1_scaffold_122_7
Akkermansia muciniphila, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

6683..7429
DNA (747bp) protein (249aa)
3-oxoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Akkermansia muciniphila (strain ATCC BAA-835) RepID=B2UQT7_AKKM8
3-oxoacyl-(acyl-carrier-protein) reductase
3-oxoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:ACD04822.1}; TaxID=349741 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia.;" source="Akkermansia muciniphila (strain ATCC BAA-835 / Muc).;"
L1_007_000M1_scaffold_122_8
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

7450..8652
DNA (1203bp) protein (401aa)
Uncharacterized protein n=1 Tax=Akkermansia sp. CAG:344 RepID=R7DXB2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD94741.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
hypothetical protein
L1_007_000M1_scaffold_122_9
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

9270..9986
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Akkermansia sp. CAG:344 RepID=R7E4A6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD97565.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
hypothetical protein
L1_007_000M1_scaffold_122_10
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

10374..10925
DNA (552bp) protein (184aa)
hypothetical protein n=1 Tax=Vibrio sp. 712i1 RepID=UPI0002DAD383
cell wall hydrolase/autolysin
Cell wall hydrolase/autolysin {ECO:0000313|EMBL:CCY25437.1}; TaxID=1262759 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
L1_007_000M1_scaffold_122_11
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(11121..11912)
DNA (792bp) protein (264aa)
TatD-related deoxyribonuclease n=1 Tax=Akkermansia sp. CAG:344 RepID=R7E7N4_9BACT
TatD-related deoxyribonuclease {ECO:0000313|EMBL:CDD97562.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
TatD-related deoxyribonuclease
L1_007_000M1_scaffold_122_12
Akkermansia muciniphila CAG:154, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(11945..12217)
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Akkermansia muciniphila CAG:154 RepID=R6J225_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDB56723.1}; TaxID=1263034 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia muciniphila CAG:154.;"
hypothetical protein
L1_007_000M1_scaffold_122_13
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

12418..13119
DNA (702bp) protein (234aa)
Succinate dehydrogenase (Or fumarate reductase) cytochrome b subunit b558 family n=1 Tax=Akkermansia sp. CAG:344 RepID=R7E3T4_9BACT
Succinate dehydrogenase (Or fumarate reductase) cytochrome b subunit b558 family {ECO:0000313|EMBL:CDD97559.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family
L1_007_000M1_scaffold_122_14
Akkermansia muciniphila, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

13140..15098
DNA (1959bp) protein (653aa)
sdhA; succinate dehydrogenase flavoprotein subunit (EC:1.3.99.1)
Succinate dehydrogenase or fumarate reductase, flavoprotein subunit {ECO:0000313|EMBL:ACD04814.1}; EC=1.3.99.1 {ECO:0000313|EMBL:ACD04814.1};; TaxID=349741 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia.;" source="Akkermansia muciniphila (strain ATCC BAA-835 / Muc).;"
Succinate dehydrogenase or fumarate reductase, flavoprotein subunit n=1 Tax=Akkermansia muciniphila (strain ATCC BAA-835) RepID=B2UQS9_AKKM8
L1_007_000M1_scaffold_122_15
Akkermansia muciniphila CAG:154, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

15139..15906
DNA (768bp) protein (256aa)
4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Akkermansia muciniphila CAG:154 RepID=R6J638_9BACT
4Fe-4S ferredoxin iron-sulfur binding domain protein {ECO:0000313|EMBL:CDB56720.1}; TaxID=1263034 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia muciniphila CAG:154.;"
succinate dehydrogenase/fumarate reductase iron-sulfur subunit
L1_007_000M1_scaffold_122_16
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(16239..16691)
DNA (453bp) protein (151aa)
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00518}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00518};; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=Akkermansia sp. CAG:344 RepID=R7E5A2_9BACT
D-tyrosyl-tRNA(Tyr) deacylase
L1_007_000M1_scaffold_122_17
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(16688..17464)
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Akkermansia sp. CAG:344 RepID=R7E5J2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD97518.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
hypothetical protein
L1_007_000M1_scaffold_122_18
Akkermansia muciniphila, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(17421..17963)
DNA (543bp) protein (181aa)
Uncharacterized protein n=2 Tax=Akkermansia RepID=B2UQS3_AKKM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD04808.1}; TaxID=349741 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia.;" source="Akkermansia muciniphila (strain ATCC BAA-835 / Muc).;"
L1_007_000M1_scaffold_122_19
Akkermansia muciniphila CAG:154, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(18063..18305)
DNA (243bp) protein (81aa)
Acyl carrier protein n=2 Tax=Akkermansia RepID=ACP_AKKM8
acyl carrier protein
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=1263034 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia muciniphila CAG:154.;"
L1_007_000M1_scaffold_122_20
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(18441..19169)
DNA (729bp) protein (243aa)
Type III pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_01274};; PanK-III {ECO:0000256|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000256|HAMAP-Rule:MF_01274}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
Type III pantothenate kinase n=1 Tax=Akkermansia sp. CAG:344 RepID=R7E5B1_9BACT
Baf family transcriptional acitvator
L1_007_000M1_scaffold_122_21
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(19175..20395)
DNA (1221bp) protein (407aa)
Monogalactosyldiacylglycerol synthase n=1 Tax=Akkermansia sp. CAG:344 RepID=R7E5K4_9BACT
Monogalactosyldiacylglycerol synthase {ECO:0000313|EMBL:CDD97528.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
monogalactosyldiacylglycerol synthase
L1_007_000M1_scaffold_122_22
Akkermansia muciniphila CAG:154, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

20487..21431
DNA (945bp) protein (315aa)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043681}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=1263034 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia muciniphila CAG:154.;"
Methionyl-tRNA formyltransferase n=2 Tax=Akkermansia RepID=FMT_AKKM8
methionyl-tRNA formyltransferase
L1_007_000M1_scaffold_122_23
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

21432..23438
DNA (2007bp) protein (669aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
UvrD/REP helicase n=1 Tax=Akkermansia sp. CAG:344 RepID=R7E7K3_9BACT
UvrD/REP helicase
L1_007_000M1_scaffold_122_24
unknown

Not on your lists

comp(23603..23746)
DNA (144bp) protein (48aa)

This feature has no annotations

L1_007_000M1_scaffold_122_25
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(24123..26420)
DNA (2298bp) protein (766aa)
SSS sodium solute transporter superfamily n=1 Tax=Akkermansia sp. CAG:344 RepID=R7E5L3_9BACT
SSS sodium solute transporter superfamily {ECO:0000313|EMBL:CDD97538.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
SSS sodium solute transporter superfamily protein
L1_007_000M1_scaffold_122_26
Akkermansia muciniphila, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(26433..27611)
DNA (1179bp) protein (393aa)
Galactokinase n=1 Tax=Akkermansia muciniphila (strain ATCC BAA-835) RepID=B2UQR6_AKKM8
galactokinase
Galactokinase {ECO:0000256|SAAS:SAAS00025843}; TaxID=349741 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia.;" source="Akkermansia muciniphila (strain ATCC BAA-835 / Muc).;"
L1_007_000M1_scaffold_122_27
Akkermansia muciniphila, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(27830..29206)
DNA (1377bp) protein (459aa)
exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase (EC:2.7.8.6)
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase {ECO:0000313|EMBL:ACD04800.1}; EC=2.7.8.6 {ECO:0000313|EMBL:ACD04800.1};; TaxID=349741 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia.;" source="Akkermansia muciniphila (strain ATCC BAA-835 / Muc).;"
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase n=1 Tax=Akkermansia muciniphila (strain ATCC BAA-835) RepID=B2UQR5_AKKM8
L1_007_000M1_scaffold_122_28
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

29605..30255
DNA (651bp) protein (217aa)
RNP-1 like RNA-binding protein n=1 Tax=Akkermansia sp. CAG:344 RepID=R7E5I2_9BACT
RNP-1 like RNA-binding protein {ECO:0000313|EMBL:CDD97586.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
RNP-1 like RNA-binding protein
L1_007_000M1_scaffold_122_29
Akkermansia muciniphila, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(30384..31118)
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Akkermansia muciniphila (strain ATCC BAA-835) RepID=B2UQR3_AKKM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD04798.1}; Flags: Precursor;; TaxID=349741 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia.;" source="Akkermansia muciniphila (strain ATCC BAA-835 / Muc).;"
L1_007_000M1_scaffold_122_30
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(31203..33107)
DNA (1905bp) protein (635aa)
Uncharacterized protein n=1 Tax=Akkermansia sp. CAG:344 RepID=R7E3W7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD97589.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
hypothetical protein
Displaying items 1-30 of 97 in total

View Taxonomy