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L1_007_000M1_scaffold_7234

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_7234_1

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comp(2..499)
DNA (498bp) protein (166aa)
Protein containing Cobyrinic acid a,c-diamide synthase domain protein n=1 Tax=human gut metagenome RepID=K1TKS2_9ZZZZ
Protein containing Cobyrinic acid a,c-diamide synthase domain protein {ECO:0000313|EMBL:EKC70333.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
ATPases involved in chromosome partitioning
L1_007_000M1_scaffold_7234_2
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(511..1446)
DNA (936bp) protein (312aa)
Toprim domain protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PRM2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KJF38954.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
TOPRIM domain-containing protein
L1_007_000M1_scaffold_7234_3
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2070..2672)
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLT6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB76384.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
HD domain.
L1_007_000M1_scaffold_7234_4
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2680..2901)
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLT5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB76383.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
L1_007_000M1_scaffold_7234_5
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2985..3929)
DNA (945bp) protein (315aa)
Putative sortase, SrtB family n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLT4_9FIRM
Putative sortase, SrtB family {ECO:0000313|EMBL:EFB76382.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
L1_007_000M1_scaffold_7234_6
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4101..4436)
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLT3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB76381.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
L1_007_000M1_scaffold_7234_7
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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4814..5623
DNA (810bp) protein (270aa)
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Glucose-1-phosphate thymidylyltransferase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLT2_9FIRM
glucose-1-phosphate thymidylyltransferase
L1_007_000M1_scaffold_7234_8
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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5645..6550
DNA (906bp) protein (302aa)
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:EFB76379.1}; EC=1.1.1.133 {ECO:0000313|EMBL:EFB76379.1};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133)
dTDP-4-dehydrorhamnose reductase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLT1_9FIRM
L1_007_000M1_scaffold_7234_9
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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6906..7559
DNA (654bp) protein (218aa)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
dTDP-glucose 4,6-dehydratase (EC:4.2.1.46)
dTDP-glucose 4,6-dehydratase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLT0_9FIRM
L1_007_000M1_scaffold_7234_10
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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7687..8568
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLS9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB76377.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
L1_007_000M1_scaffold_7234_11
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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8713..9192
DNA (480bp) protein (160aa)
Transcriptional regulator, AsnC family n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLS8_9FIRM
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:EFB76376.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Transcriptional regulators
L1_007_000M1_scaffold_7234_12
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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9192..10367
DNA (1176bp) protein (392aa)
Aminotransferase, class I/II {ECO:0000313|EMBL:EFB76375.1}; EC=2.6.1.- {ECO:0000313|EMBL:EFB76375.1};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Aminotransferase, class I/II n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLS7_9FIRM
Aspartate/tyrosine/aromatic aminotransferase
L1_007_000M1_scaffold_7234_13
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10409..11305
DNA (897bp) protein (299aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
4-diphosphocytidyl-2C-methyl-D-erythritol kinase (EC:2.7.1.148)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLS6_9FIRM
L1_007_000M1_scaffold_7234_14
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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11481..12104
DNA (624bp) protein (208aa)
Putative stage II sporulation protein R n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLS5_9FIRM
Putative stage II sporulation protein R {ECO:0000313|EMBL:EFB76373.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
putative stage II sporulation protein R
L1_007_000M1_scaffold_7234_15
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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12222..15554
DNA (3333bp) protein (1111aa)
Putative ATP-dependent nuclease subunit B n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLS4_9FIRM
Putative ATP-dependent nuclease subunit B {ECO:0000313|EMBL:EFB76372.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
ATP-dependent nuclease, subunit B
L1_007_000M1_scaffold_7234_16
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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15908..19396
DNA (3489bp) protein (1163aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Putative ATP-dependent nuclease subunit A n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLS3_9FIRM
recombination helicase AddA
Displaying 16 items

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