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L1_007_000M1_scaffold_4214

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_4214_1
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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95..1963
DNA (1869bp) protein (623aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PRV6_9FIRM
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
glucose-inhibited division protein A
L1_007_000M1_scaffold_4214_2
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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2092..2796
DNA (705bp) protein (235aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00277524};; 16S rRNA 7-methylguanosine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00074}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
16S rRNA m(7)G-527 methyltransferase (EC:2.1.-.- 2.1.1.-)
Ribosomal RNA small subunit methyltransferase G n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PRV5_9FIRM
L1_007_000M1_scaffold_4214_3
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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2976..3842
DNA (867bp) protein (289aa)
ParB-like protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PRV4_9FIRM
ParB-like protein {ECO:0000313|EMBL:EFB74577.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
ParB-like partition proteins
L1_007_000M1_scaffold_4214_4
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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4172..4936
DNA (765bp) protein (255aa)
CobQ/CobB/MinD/ParA nucleotide binding domain protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PRV3_9FIRM
CobQ/CobB/MinD/ParA nucleotide binding domain protein {ECO:0000313|EMBL:EFB74576.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
cobyrinic acid a,c-diamide synthase
L1_007_000M1_scaffold_4214_5
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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4949..5830
DNA (882bp) protein (294aa)
Stage 0 sporulation protein J n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PRV2_9FIRM
Stage 0 sporulation protein J {ECO:0000313|EMBL:EFB74575.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
chromosome segregation DNA-binding protein
L1_007_000M1_scaffold_4214_6
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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5963..6808
DNA (846bp) protein (282aa)
Serine--tRNA ligase {ECO:0000313|EMBL:EFB74574.1}; EC=6.1.1.11 {ECO:0000313|EMBL:EFB74574.1};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
seryl-tRNA synthetase (EC:6.1.1.11)
Serine--tRNA ligase n=2 Tax=root RepID=D1PRV1_9FIRM
L1_007_000M1_scaffold_4214_7
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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6835..7233
DNA (399bp) protein (133aa)
Serine--tRNA ligase {ECO:0000313|EMBL:EFB74574.1}; EC=6.1.1.11 {ECO:0000313|EMBL:EFB74574.1};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
seryl-tRNA synthetase (EC:6.1.1.11)
Serine--tRNA ligase n=2 Tax=root RepID=D1PRV1_9FIRM
L1_007_000M1_scaffold_4214_8

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comp(7905..9038)
DNA (1134bp) protein (378aa)
Ig domain-containing protein group 2 domain-containing protein (Fragment) n=1 Tax=human gut metagenome RepID=K1U5X2_9ZZZZ
Ig domain-containing protein group 2 domain-containing protein {ECO:0000313|EMBL:EKC80577.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Ig-like domain-containing surface protein
L1_007_000M1_scaffold_4214_9

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9355..9918
DNA (564bp) protein (188aa)
Metal-dependent hydrolase n=1 Tax=human gut metagenome RepID=K1SWU7_9ZZZZ
Metal-dependent hydrolase {ECO:0000313|EMBL:EKC65062.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Predicted metal-dependent hydrolase
L1_007_000M1_scaffold_4214_10
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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9984..11417
DNA (1434bp) protein (478aa)
Polysaccharide biosynthesis protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PSN9_9FIRM
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:EFB74286.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Membrane protein involved in the export of O-antigen and teichoic acid
L1_007_000M1_scaffold_4214_11
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(11660..14038)
DNA (2379bp) protein (793aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2SWS8_LEIAQ
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ERK69738.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
extracellular endoglucanase precursor
L1_007_000M1_scaffold_4214_12
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14054..14764)
DNA (711bp) protein (237aa)
Arylsulfatase {ECO:0000313|EMBL:EFB74289.1}; EC=3.1.6.- {ECO:0000313|EMBL:EFB74289.1};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Arylsulfatase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PSP2_9FIRM
Displaying 12 items

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