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L1_007_000M1_scaffold_3889

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_3889_1
Firmicutes bacterium ASF500, Firmicutes, Bacteria

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comp(2..187)
DNA (186bp) protein (62aa)
Beta-galactosidase {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613}; EC=3.2.1.23 {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613};; Lactase {ECO:0000256|RuleBase:RU361154}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
lacL; beta-galactosidase large subunit (EC:3.2.1.23)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YHC8_9FIRM
L1_007_000M1_scaffold_3889_2
Firmicutes bacterium CAG:212, Firmicutes, Bacteria

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comp(387..1223)
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:212 RepID=R5Y1A8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA14981.1}; TaxID=1263009 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:212.;"
xylose isomerase domain-containing protein TIM barrel
L1_007_000M1_scaffold_3889_3
Roseburia sp. CAG:100, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1227..1928)
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:100 RepID=R7R591_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF45869.1}; TaxID=1262940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:100.;"
hypothetical protein
L1_007_000M1_scaffold_3889_4
Roseburia sp. CAG:100, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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2092..3444
DNA (1353bp) protein (451aa)
Glycoside hydrolase family 28 n=1 Tax=Roseburia sp. CAG:100 RepID=R7R816_9FIRM
Glycoside hydrolase family 28 {ECO:0000313|EMBL:CDF45870.1}; TaxID=1262940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:100.;"
glycoside hydrolase family protein
L1_007_000M1_scaffold_3889_5
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3625..3849
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SHV4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDP20684.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
L-rhamnose 1-epimerase
L1_007_000M1_scaffold_3889_6
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4000..7215)
DNA (3216bp) protein (1072aa)
PAS domain S-box protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H7I5_9FIRM
PAS domain S-box protein {ECO:0000313|EMBL:EEU96128.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
PAS domain S-box
L1_007_000M1_scaffold_3889_7
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7656..8516
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S849_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDP22632.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
hypothetical protein
L1_007_000M1_scaffold_3889_8
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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8737..9912
DNA (1176bp) protein (392aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PQF2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB75075.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
L1_007_000M1_scaffold_3889_9
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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10373..11443
DNA (1071bp) protein (357aa)
Branched-chain-amino-acid transaminase {ECO:0000313|EMBL:EFB75434.1}; EC=2.6.1.42 {ECO:0000313|EMBL:EFB75434.1};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
branched chain amino acid aminotransferase apoenzyme (EC:2.6.1.42)
Branched-chain-amino-acid transaminase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PPH2_9FIRM
L1_007_000M1_scaffold_3889_10
unknown

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comp(11943..12128)
DNA (186bp) protein (62aa)

This feature has no annotations

Displaying 10 items

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