name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
L1_007_000M1_scaffold_1237_1
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
2..841
----------------- DNA (840bp) protein (280aa) |
glutaconyl-CoA decarboxylase beta subunit (EC:4.1.1.3 4.1.1.70)
Sodium ion-translocating decarboxylase, beta subunit n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PSP5_9FIRM
Sodium ion-translocating decarboxylase, beta subunit {ECO:0000313|EMBL:EFB74278.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
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L1_007_000M1_scaffold_1237_2
unknown
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Not on your lists |
comp(1205..1888)
----------------- DNA (684bp) protein (228aa) |
This feature has no annotations |
|
L1_007_000M1_scaffold_1237_3
unknown
|
Not on your lists |
comp(1892..2251)
----------------- DNA (360bp) protein (120aa) |
This feature has no annotations |
|
L1_007_000M1_scaffold_1237_4
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(2255..2743)
----------------- DNA (489bp) protein (163aa) |
Sigma-70 region 2 n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2AMK4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KJF38395.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog
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|
L1_007_000M1_scaffold_1237_5 |
Not on your lists |
3097..3987
----------------- DNA (891bp) protein (297aa) |
Metal-dependent hydrolases of the beta-lactamase superfamily III (EC:3.1.26.11)
Putative uncharacterized protein n=1 Tax=uncultured organism RepID=D9ZEA3_9ZZZZ
Putative uncharacterized protein {ECO:0000313|EMBL:ADD61657.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
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L1_007_000M1_scaffold_1237_6 |
Not on your lists |
3984..4316
----------------- DNA (333bp) protein (111aa) |
Putative uncharacterized protein n=1 Tax=uncultured organism RepID=D9ZEA2_9ZZZZ
Putative uncharacterized protein {ECO:0000313|EMBL:ADD61656.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
hypothetical protein
|
|
L1_007_000M1_scaffold_1237_7 |
Not on your lists |
4422..4922
----------------- DNA (501bp) protein (167aa) |
Putative uncharacterized protein n=1 Tax=uncultured organism RepID=D9ZEA1_9ZZZZ
Putative uncharacterized protein {ECO:0000313|EMBL:ADD61655.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
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L1_007_000M1_scaffold_1237_8
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
5124..6257
----------------- DNA (1134bp) protein (378aa) |
Exonuclease SbcCD, D subunit n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PQD5_9FIRM
Exonuclease SbcCD, D subunit {ECO:0000313|EMBL:EFB75092.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
exonuclease SbcD
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L1_007_000M1_scaffold_1237_9 |
Not on your lists |
6254..8749
----------------- DNA (2496bp) protein (832aa) |
Putative uncharacterized protein n=1 Tax=uncultured organism RepID=D9ZE99_9ZZZZ
Putative uncharacterized protein {ECO:0000313|EMBL:ADD61653.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
ATPase involved in DNA repair
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L1_007_000M1_scaffold_1237_10 |
Not on your lists |
8929..10332
----------------- DNA (1404bp) protein (468aa) |
Putative uncharacterized protein n=1 Tax=uncultured organism RepID=D9ZE98_9ZZZZ
Putative uncharacterized protein {ECO:0000313|EMBL:ADD61652.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
Arginine/lysine/ornithine decarboxylases
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L1_007_000M1_scaffold_1237_11
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
10561..10707
----------------- DNA (147bp) protein (49aa) |
RSAM-modified six-cysteine peptide n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PQF4_9FIRM
RSAM-modified six-cysteine peptide {ECO:0000313|EMBL:EFB75077.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
|
|
L1_007_000M1_scaffold_1237_12 |
Not on your lists |
10880..12388
----------------- DNA (1509bp) protein (503aa) |
Putative uncharacterized protein n=1 Tax=uncultured organism RepID=D9ZE97_9ZZZZ
Putative uncharacterized protein {ECO:0000313|EMBL:ADD61651.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
Arylsulfatase regulator (Fe-S oxidoreductase)
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L1_007_000M1_scaffold_1237_13
unknown
|
Not on your lists |
comp(12606..12773)
----------------- DNA (168bp) protein (56aa) |
This feature has no annotations |
|
L1_007_000M1_scaffold_1237_14
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(12819..14606)
----------------- DNA (1788bp) protein (596aa) |
Peptidase, M24 family {ECO:0000313|EMBL:EFB75083.1}; EC=3.4.-.- {ECO:0000313|EMBL:EFB75083.1};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Xaa-Pro aminopeptidase (EC:3.4.11.9)
Peptidase, M24 family n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PQG0_9FIRM
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L1_007_000M1_scaffold_1237_15
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
15239..16468
----------------- DNA (1230bp) protein (410aa) |
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M4F6_9FIRM
Putative GTPases (G3E family)
Uncharacterized protein {ECO:0000313|EMBL:EOS65949.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
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L1_007_000M1_scaffold_1237_16
unknown
|
Not on your lists |
16718..16840
----------------- DNA (123bp) protein (41aa) |
This feature has no annotations |
|
L1_007_000M1_scaffold_1237_17
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
16833..17810
----------------- DNA (978bp) protein (326aa) |
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PQF7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB75080.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
CobW/HypB/UreG, nucleotide-binding domain.
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L1_007_000M1_scaffold_1237_18
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(17947..18921)
----------------- DNA (975bp) protein (325aa) |
ErfK/YbiS/YcfS/YnhG n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PRP7_9FIRM
ErfK/YbiS/YcfS/YnhG {ECO:0000313|EMBL:EFB74588.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
|
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L1_007_000M1_scaffold_1237_19
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(18931..20130)
----------------- DNA (1200bp) protein (400aa) |
Aminotransferase, class I/II {ECO:0000313|EMBL:EFB74587.1}; EC=2.6.1.- {ECO:0000313|EMBL:EFB74587.1};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
aminotransferase (EC:2.6.1.1)
Aminotransferase, class I/II n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PRP6_9FIRM
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L1_007_000M1_scaffold_1237_20
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(20426..21082)
----------------- DNA (657bp) protein (219aa) |
haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED (EC:3.1.3.18)
Putative phosphoglycolate phosphatase, bacterial n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PRP5_9FIRM
Putative phosphoglycolate phosphatase, bacterial {ECO:0000313|EMBL:EFB74586.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
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L1_007_000M1_scaffold_1237_21
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
21254..22114
----------------- DNA (861bp) protein (287aa) |
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphate phosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Undecaprenyl-diphosphatase (EC:3.6.1.27)
Undecaprenyl-diphosphatase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PRP4_9FIRM
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L1_007_000M1_scaffold_1237_22
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(22281..23732)
----------------- DNA (1452bp) protein (484aa) |
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Signal transduction histidine kinase (EC:2.7.13.3)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PSD7_9FIRM
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L1_007_000M1_scaffold_1237_23
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(23725..24417)
----------------- DNA (693bp) protein (231aa) |
Response regulator receiver domain protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PSD8_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:EFB74423.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
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L1_007_000M1_scaffold_1237_24
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(24757..25500)
----------------- DNA (744bp) protein (248aa) |
Na/Pi-cotransporter II-like protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PSD9_9FIRM
Na/Pi-cotransporter II-like protein {ECO:0000313|EMBL:EFB74424.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Na/Pi-cotransporter
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L1_007_000M1_scaffold_1237_25
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(25494..26495)
----------------- DNA (1002bp) protein (334aa) |
Na/Pi-cotransporter II-like protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PSD9_9FIRM
Na/Pi-cotransporter II-like protein {ECO:0000313|EMBL:EFB74424.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Na/Pi-cotransporter
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L1_007_000M1_scaffold_1237_26
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
27390..28340
----------------- DNA (951bp) protein (317aa) |
Putative Phosphate-binding protein PstS 2 n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PSE2_9FIRM
Putative Phosphate-binding protein PstS 2 {ECO:0000313|EMBL:EFB74427.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
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L1_007_000M1_scaffold_1237_27
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
28469..29362
----------------- DNA (894bp) protein (298aa) |
Phosphate ABC transporter, permease protein PstC n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PSE3_9FIRM
Phosphate ABC transporter, permease protein PstC {ECO:0000313|EMBL:EFB74428.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
phosphate ABC transporter membrane protein 1, PhoT family (TC 3.A.1.7.1)
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L1_007_000M1_scaffold_1237_28
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
29642..30169
----------------- DNA (528bp) protein (176aa) |
Phosphate ABC transporter, permease protein PstA n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PSE4_9FIRM
Phosphate ABC transporter, permease protein PstA {ECO:0000313|EMBL:EFB74429.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
phosphate ABC transporter membrane protein 2, PhoT family (TC 3.A.1.7.1)
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L1_007_000M1_scaffold_1237_29
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
30453..31205
----------------- DNA (753bp) protein (251aa) |
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01702}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
phosphate ABC transporter ATP-binding protein, PhoT family (TC 3.A.1.7.1) (EC:3.6.3.27)
Phosphate ABC transporter, ATP-binding protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PSE5_9FIRM
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L1_007_000M1_scaffold_1237_30
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
31219..31893
----------------- DNA (675bp) protein (225aa) |
Phosphate-specific transport system accessory protein PhoU n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PSE6_9FIRM
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
phosphate transport system regulatory protein PhoU
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