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L1_007_000M1_scaffold_1866

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_1866_1
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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53..1051
DNA (999bp) protein (333aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJL9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB76967.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
L1_007_000M1_scaffold_1866_2
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1231..2547
DNA (1317bp) protein (439aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PPK2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB75346.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
L1_007_000M1_scaffold_1866_3
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2611..4332
DNA (1722bp) protein (574aa)
FHA domain protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PPK1_9FIRM
FHA domain protein {ECO:0000313|EMBL:EFB75345.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
L1_007_000M1_scaffold_1866_4
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4403..4891
DNA (489bp) protein (163aa)
Uncharacterized protein (Fragment) n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PPJ9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB75461.1}; Flags: Fragment;; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
FHA domain-containing protein
L1_007_000M1_scaffold_1866_5
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4904..6421
DNA (1518bp) protein (506aa)
ABC transporter ATP-binding/permease protein (EC:3.6.3.-)
ABC transporter, ATP-binding protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PPJ8_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFB75460.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
L1_007_000M1_scaffold_1866_6
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6409..7242
DNA (834bp) protein (278aa)
ABC transporter ATP-binding/permease protein (EC:3.6.3.-)
ABC-2 type transporter n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PPJ7_9FIRM
ABC-2 type transporter {ECO:0000313|EMBL:EFB75459.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
L1_007_000M1_scaffold_1866_7
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7458..8369)
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PPJ6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB75458.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Predicted membrane protein
L1_007_000M1_scaffold_1866_8
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8356..9090)
DNA (735bp) protein (245aa)
tRNA (guanine-N(7)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; EC=2.1.1.33 {ECO:0000256|HAMAP-Rule:MF_01057};; tRNA (guanine(46)-N(7))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; tRNA(m7G46)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
tRNA (guanine-N(7)-)-methyltransferase (EC:2.1.1.33)
tRNA (guanine-N(7)-)-methyltransferase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PPJ5_9FIRM
L1_007_000M1_scaffold_1866_9
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9223..10377)
DNA (1155bp) protein (385aa)
Threonine/alanine tRNA ligase second additional domain protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PPJ4_9FIRM
Threonine/alanine tRNA ligase second additional domain protein {ECO:0000313|EMBL:EFB75456.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Alanyl-tRNA synthetase
L1_007_000M1_scaffold_1866_10
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10511..11752
DNA (1242bp) protein (414aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PPJ3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB75455.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
L1_007_000M1_scaffold_1866_11
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11841..13358
DNA (1518bp) protein (506aa)
4-alpha-glucanotransferase {ECO:0000256|RuleBase:RU361207}; EC=2.4.1.25 {ECO:0000256|RuleBase:RU361207};; Amylomaltase {ECO:0000256|RuleBase:RU361207}; Disproportionating enzyme {ECO:0000256|RuleBase:RU361207}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
4-alpha-glucanotransferase (EC:2.4.1.25)
4-alpha-glucanotransferase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PPJ2_9FIRM
L1_007_000M1_scaffold_1866_12
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13509..14300
DNA (792bp) protein (264aa)
Diguanylate cyclase (GGDEF) domain protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PPJ1_9FIRM
Diguanylate cyclase (GGDEF) domain protein {ECO:0000313|EMBL:EFB75453.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
L1_007_000M1_scaffold_1866_13
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14370..14801
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PPJ0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB75452.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
L1_007_000M1_scaffold_1866_14
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14949..15989)
DNA (1041bp) protein (347aa)
Uncharacterized protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I947_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE48130.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
Predicted membrane protein, putative toxin regulator
L1_007_000M1_scaffold_1866_15
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16182..16574
DNA (393bp) protein (131aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=D3ACC1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ63122.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
L1_007_000M1_scaffold_1866_16
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16592..17146
DNA (555bp) protein (185aa)
DJ-1 family protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PPH9_9FIRM
DJ-1 family protein {ECO:0000313|EMBL:EFB75441.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
DJ-1 family protein
L1_007_000M1_scaffold_1866_17
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17624..18298)
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SG47_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDP20160.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
SprT-like family.
L1_007_000M1_scaffold_1866_18
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18729..19301
DNA (573bp) protein (191aa)
DNA-invertase hin n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UYC3_CLOBO
DNA-invertase hin {ECO:0000313|EMBL:EES49980.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
hin; DNA-invertase Hin
L1_007_000M1_scaffold_1866_19
unknown

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19301..19618
DNA (318bp) protein (106aa)

This feature has no annotations

L1_007_000M1_scaffold_1866_20
Lachnospiraceae bacterium CAG:215, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19880..20551
DNA (672bp) protein (224aa)
Plasmid mobilization protein n=1 Tax=Lachnospiraceae bacterium CAG:215 RepID=R6F515_9FIRM
Plasmid mobilization protein {ECO:0000313|EMBL:CDA97102.1}; TaxID=1262985 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:215.;"
mob protein
L1_007_000M1_scaffold_1866_21
Coprococcus catus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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20562..24257
DNA (3696bp) protein (1232aa)
Putative uncharacterized protein n=1 Tax=Coprococcus catus GD/7 RepID=D4J924_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK80845.1}; TaxID=717962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus catus GD/7.;"
L1_007_000M1_scaffold_1866_22
unknown

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24718..24828
DNA (111bp) protein (37aa)

This feature has no annotations

L1_007_000M1_scaffold_1866_23
Ruminiclostridium thermocellum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25363..26568)
DNA (1206bp) protein (402aa)
Tn7-like transposition protein C n=1 Tax=Clostridium thermocellum JW20 RepID=D1NQC3_CLOTM
Tn7-like transposition protein C
TniB family protein {ECO:0000313|EMBL:ABN53093.1}; TaxID=203119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium thermocellum (strain ATCC 27405 / DSM 1237 / NBRC 103400 /; NCIMB 10682 / NRRL B-4536 / VPI 7372) (Ruminiclostridium; thermocellum).;"
L1_007_000M1_scaffold_1866_24
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(26558..28435)
DNA (1878bp) protein (626aa)
Conserved domain protein n=1 Tax=Ruminococcus albus 8 RepID=E9SEU6_RUMAL
Conserved domain protein {ECO:0000313|EMBL:EGC02206.1}; TaxID=246199 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus albus 8.;"
Integrase core domain.
L1_007_000M1_scaffold_1866_25

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comp(28422..28814)
DNA (393bp) protein (131aa)
Protein containing TnsA endonuclease (Fragment) n=1 Tax=human gut metagenome RepID=K1TUM0_9ZZZZ
Protein containing TnsA endonuclease {ECO:0000313|EMBL:EKC71374.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L1_007_000M1_scaffold_1866_26
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29271..29675)
DNA (405bp) protein (135aa)
Methylglyoxal synthase {ECO:0000256|SAAS:SAAS00089917}; EC=4.2.3.3 {ECO:0000256|SAAS:SAAS00089921};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
methylglyoxal synthase (EC:4.2.3.3)
Putative methylglyoxal synthase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PPI0_9FIRM
L1_007_000M1_scaffold_1866_27
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29927..30505
DNA (579bp) protein (193aa)
Ricin-type beta-trefoil lectin domain protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PPI2_9FIRM
Ricin-type beta-trefoil lectin domain protein {ECO:0000313|EMBL:EFB75444.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Ricin-type beta-trefoil lectin domain.
L1_007_000M1_scaffold_1866_28
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30600..31787
DNA (1188bp) protein (396aa)
DEAD/DEAH box helicase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PPI4_9FIRM
DEAD/DEAH box helicase {ECO:0000313|EMBL:EFB75445.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Superfamily II DNA and RNA helicases
L1_007_000M1_scaffold_1866_29
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31980..32663)
DNA (684bp) protein (228aa)
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 1 {ECO:0000256|SAAS:SAAS00131176}; EC=3.2.2.9 {ECO:0000256|SAAS:SAAS00064821};; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase {ECO:0000256|SAAS:SAAS00064819}; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 2 {ECO:0000256|SAAS:SAAS00131282}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase (EC:3.2.2.9)
MTA/SAH nucleosidase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PPI8_9FIRM
L1_007_000M1_scaffold_1866_30
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32699..33829)
DNA (1131bp) protein (377aa)
Ribosome-binding ATPase YchF n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PPI7_9FIRM
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
GTP-binding protein YchF
Displaying items 1-30 of 31 in total

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