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L1_007_000M1_scaffold_507

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_507_1
Firmicutes bacterium CAG:212, Firmicutes, Bacteria

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376..1098
DNA (723bp) protein (241aa)
Putative DNA-binding response regulator n=1 Tax=Firmicutes bacterium CAG:212 RepID=R5XGL5_9FIRM
Putative DNA-binding response regulator {ECO:0000313|EMBL:CDA13965.1}; TaxID=1263009 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:212.;"
putative two-component response regulator
L1_007_000M1_scaffold_507_2
unknown

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1202..1510
DNA (309bp) protein (103aa)

This feature has no annotations

L1_007_000M1_scaffold_507_3
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1799..3031
DNA (1233bp) protein (411aa)
glycerate 2-kinase (EC:1.1.1.81 2.7.1.-)
Hydroxypyruvate reductase n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9LIH9_9FIRM
Hydroxypyruvate reductase {ECO:0000313|EMBL:EOS58348.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
L1_007_000M1_scaffold_507_4
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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3146..3853
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6P1A9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM97801.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
Response regulator of the LytR/AlgR family
L1_007_000M1_scaffold_507_5
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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3864..5198
DNA (1335bp) protein (445aa)
Putative sensor histidine kinase VirS n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6P1B0_9FIRM
Putative sensor histidine kinase VirS {ECO:0000313|EMBL:EDM97802.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
hypothetical protein
L1_007_000M1_scaffold_507_6
Coprococcus catus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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5477..6298
DNA (822bp) protein (274aa)
Hydroxyethylthiazole kinase, sugar kinase family (EC:2.7.1.50)
Hydroxyethylthiazole kinase {ECO:0000256|HAMAP-Rule:MF_00228, ECO:0000256|SAAS:SAAS00137030}; EC=2.7.1.50 {ECO:0000256|HAMAP-Rule:MF_00228, ECO:0000256|SAAS:SAAS00137030};; 4-methyl-5-beta-hydroxyethylthiazole kinase {ECO:0000256|HAMAP-Rule:MF_00228}; TaxID=717962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus catus GD/7.;"
Hydroxyethylthiazole kinase n=1 Tax=Coprococcus catus GD/7 RepID=D4JBB5_9FIRM
L1_007_000M1_scaffold_507_7
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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6285..6926
DNA (642bp) protein (214aa)
Thiamine-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; Short=TP synthase {ECO:0000256|HAMAP-Rule:MF_00097};; Short=TPS {ECO:0000256|HAMAP-Rule:MF_00097};; EC=2.5.1.3 {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826};; Thiamine-phosphate pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
thiamine-phosphate diphosphorylase (EC:2.5.1.3)
Thiamine-phosphate synthase n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GI46_9FIRM
L1_007_000M1_scaffold_507_8
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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6919..7566
DNA (648bp) protein (216aa)
Haloacid dehalogenase superfamily subfamily IA variant 3 with third motif having DD or ED n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GTS5_9FIRM
Haloacid dehalogenase superfamily subfamily IA variant 3 with third motif having DD or ED {ECO:0000313|EMBL:CDB25114.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
L1_007_000M1_scaffold_507_9
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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7699..8496
DNA (798bp) protein (266aa)
phosphomethylpyrimidine kinase (EC:2.7.4.7)
Phosphomethylpyrimidine kinase n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6TNR9_9FIRM
Phosphomethylpyrimidine kinase {ECO:0000313|EMBL:CDC69506.1}; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
L1_007_000M1_scaffold_507_10
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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8493..9662
DNA (1170bp) protein (390aa)
Putative hydroxymethylpyrimidine transporter CytX n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6HGJ2_9FIRM
Putative hydroxymethylpyrimidine transporter CytX {ECO:0000313|EMBL:CDB25117.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
putative cytosine permease
L1_007_000M1_scaffold_507_11
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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9878..10375
DNA (498bp) protein (166aa)
cob(I)yrinic acid a,c-diamide adenosyltransferase (EC:2.5.1.17)
Putative cob(I)yrinic acid a,c-diamide adenosyltransferase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PKS3_9FIRM
Putative cob(I)yrinic acid a,c-diamide adenosyltransferase {ECO:0000313|EMBL:EFB76581.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
L1_007_000M1_scaffold_507_12
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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10771..13782
DNA (3012bp) protein (1004aa)
bgl5; beta-glucosidase (EC:3.2.1.21)
Glycosyl hydrolase family 3 N-terminal domain protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FT39_9FIRM
Glycosyl hydrolase family 3 N-terminal domain protein {ECO:0000313|EMBL:EEG94268.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
L1_007_000M1_scaffold_507_13
unknown

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14305..14496
DNA (192bp) protein (64aa)

This feature has no annotations

L1_007_000M1_scaffold_507_14
Eubacterium plexicaudatum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14543..15175)
DNA (633bp) protein (211aa)
Pyrrolidone-carboxylate peptidase {ECO:0000256|HAMAP-Rule:MF_00417}; EC=3.4.19.3 {ECO:0000256|HAMAP-Rule:MF_00417};; 5-oxoprolyl-peptidase {ECO:0000256|HAMAP-Rule:MF_00417}; Pyroglutamyl-peptidase I {ECO:0000256|HAMAP-Rule:MF_00417}; TaxID=1235802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium plexicaudatum ASF492.;"
pyrrolidone-carboxylate peptidase (EC:3.4.19.3)
Pyrrolidone-carboxylate peptidase n=1 Tax=Eubacterium plexicaudatum ASF492 RepID=N2A964_9FIRM
L1_007_000M1_scaffold_507_15
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15194..15763)
DNA (570bp) protein (190aa)
Peptidase, S54 family {ECO:0000313|EMBL:EDN01878.1}; EC=3.4.21.- {ECO:0000313|EMBL:EDN01878.1};; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
Peptidase, S54 family n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NPV3_9FIRM
rhomboid family protein
L1_007_000M1_scaffold_507_16
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15940..17289)
DNA (1350bp) protein (450aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 1_4_56FAA RepID=F7JN26_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN37227.1}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
MATE efflux family protein
L1_007_000M1_scaffold_507_17
Clostridium sp. CAG:921, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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17474..18355
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:921 RepID=R5L2F3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY71524.1}; TaxID=1262847 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:921.;"
Uncharacterized Fe-S center protein
L1_007_000M1_scaffold_507_18
Ruminococcus champanellensis, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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18421..19083
DNA (663bp) protein (221aa)
DNA-3-methyladenine glycosylase II (EC:3.2.2.21)
DNA-3-methyladenine glycosylase II {ECO:0000313|EMBL:CBL17012.1}; EC=3.2.2.21 {ECO:0000313|EMBL:CBL17012.1};; TaxID=213810 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus champanellensis (strain DSM 18848 / JCM 17042 / 18P13).;"
Base excision DNA repair protein, HhH-GPD family n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2PRK9_9FIRM
L1_007_000M1_scaffold_507_19
Coprococcus catus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19103..19633
DNA (531bp) protein (177aa)
O-6-methylguanine DNA methyltransferase (EC:2.1.1.63)
O-6-methylguanine DNA methyltransferase {ECO:0000313|EMBL:CBK81522.1}; EC=2.1.1.63 {ECO:0000313|EMBL:CBK81522.1};; TaxID=717962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus catus GD/7.;"
O-6-methylguanine DNA methyltransferase n=1 Tax=Coprococcus catus GD/7 RepID=D4JB01_9FIRM
L1_007_000M1_scaffold_507_20
unknown

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19728..20174
DNA (447bp) protein (149aa)

This feature has no annotations

L1_007_000M1_scaffold_507_21
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20246..22582)
DNA (2337bp) protein (779aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S835_9FIRM
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:EDP22621.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
Signal transduction histidine kinase
L1_007_000M1_scaffold_507_22
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(22569..24389)
DNA (1821bp) protein (607aa)
Tat pathway signal sequence domain protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S834_9FIRM
carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-)
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:EDP22620.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
L1_007_000M1_scaffold_507_23
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(24576..26648)
DNA (2073bp) protein (691aa)
Heavy metal translocating P-type ATPase n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6PUS6_9FIRM
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:CDC27300.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
ATPase, P-type (transporting), HAD superfamily, subfamily IC/heavy metal translocating P-type ATPase
L1_007_000M1_scaffold_507_24
Firmicutes bacterium CAG:882, Firmicutes, Bacteria

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comp(26770..27036)
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:882 RepID=R7BKV4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD66430.1}; TaxID=1262991 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:882.;"
hypothetical protein
L1_007_000M1_scaffold_507_25
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(27169..28161)
DNA (993bp) protein (331aa)
Uncharacterized protein n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4KYQ8_OSCVS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAK98702.1}; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 /; Sjm18-20).;"
L1_007_000M1_scaffold_507_26
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(28281..29015)
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S896_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDP22440.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
hypothetical protein
L1_007_000M1_scaffold_507_27
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(29020..29769)
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S895_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDP22439.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
L1_007_000M1_scaffold_507_28
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(29771..30697)
DNA (927bp) protein (309aa)
ABC-type multidrug transport system, ATPase component n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K5A9_9FIRM
ABC-type multidrug transport system, ATPase component
ABC-type multidrug transport system, ATPase component {ECO:0000313|EMBL:CBL02768.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L1_007_000M1_scaffold_507_29
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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30865..31584
DNA (720bp) protein (240aa)
Response regulator receiver domain protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H417_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:EEU97349.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
two component transcriptional regulator, winged helix family
L1_007_000M1_scaffold_507_30
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31581..32945
DNA (1365bp) protein (455aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H416_9FIRM
Signal transduction histidine kinase
Displaying items 1-30 of 43 in total

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