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L1_007_000M1_scaffold_658

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_658_1
unknown

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2..73
DNA (72bp) protein (24aa)

This feature has no annotations

L1_007_000M1_scaffold_658_2
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(149..1702)
DNA (1554bp) protein (518aa)
phosphoenolpyruvate-protein phosphotransferase (EC:2.7.3.9)
PEP-utilizing enzyme, TIM barrel domain protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLW1_9FIRM
PEP-utilizing enzyme, TIM barrel domain protein {ECO:0000313|EMBL:EFB76409.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
L1_007_000M1_scaffold_658_3
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1755..2939)
DNA (1185bp) protein (395aa)
Phospholipase, patatin family n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLW0_9FIRM
Phospholipase, patatin family {ECO:0000313|EMBL:EFB76408.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Predicted esterase of the alpha-beta hydrolase superfamily
L1_007_000M1_scaffold_658_4
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3185..4114
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLV9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB76407.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
dTDP-glucose pyrophosphorylase
L1_007_000M1_scaffold_658_5
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4428..4655
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLU7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB76395.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
L1_007_000M1_scaffold_658_6
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4746..5978
DNA (1233bp) protein (411aa)
Peptidase, M23 family n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLU6_9FIRM
Peptidase, M23 family {ECO:0000313|EMBL:EFB76394.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Membrane-bound metallopeptidase
L1_007_000M1_scaffold_658_7
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6138..8111
DNA (1974bp) protein (658aa)
Peptidase, M23 family n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLU5_9FIRM
Peptidase, M23 family {ECO:0000313|EMBL:EFB76393.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Membrane-bound metallopeptidase
L1_007_000M1_scaffold_658_8
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8258..9061
DNA (804bp) protein (268aa)
Putative dipicolinic acid synthetase, A subunit n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLU4_9FIRM
Putative dipicolinic acid synthetase, A subunit {ECO:0000313|EMBL:EFB76392.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain.
L1_007_000M1_scaffold_658_9
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9058..9639
DNA (582bp) protein (194aa)
Putative dipicolinic acid synthetase, B subunit n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLU3_9FIRM
Putative dipicolinic acid synthetase, B subunit {ECO:0000313|EMBL:EFB76391.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Phosphopantothenoylcysteine synthetase/decarboxylase
L1_007_000M1_scaffold_658_10
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9867..11138
DNA (1272bp) protein (424aa)
UDP-N-acetylglucosamine enolpyruvyl transferase (EC:2.5.1.7)
Putative UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLU2_9FIRM
Putative UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000313|EMBL:EFB76390.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
L1_007_000M1_scaffold_658_11
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11451..12692
DNA (1242bp) protein (414aa)
Cell division protein FtsZ n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLU0_9FIRM
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU000631}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
cell division protein FtsZ
L1_007_000M1_scaffold_658_12
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12723..13730
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLT9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB76387.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
L1_007_000M1_scaffold_658_13
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14228..17155
DNA (2928bp) protein (976aa)
Putative CoA-substrate-specific enzyme activase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJ88_9FIRM
Putative CoA-substrate-specific enzyme activase {ECO:0000313|EMBL:EFB77248.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
L1_007_000M1_scaffold_658_14
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17167..18489
DNA (1323bp) protein (441aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJ87_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB77247.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
L1_007_000M1_scaffold_658_15
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18792..19841)
DNA (1050bp) protein (350aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CIP1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO28015.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Transposase and inactivated derivatives, IS30 family
L1_007_000M1_scaffold_658_16
unknown

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20431..20631
DNA (201bp) protein (67aa)

This feature has no annotations

L1_007_000M1_scaffold_658_17
Firmicutes bacterium CAG:110, Firmicutes, Bacteria

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comp(20679..20921)
DNA (243bp) protein (81aa)
Conserved domain protein n=1 Tax=Firmicutes bacterium CAG:110 RepID=R5EDV9_9FIRM
Conserved domain protein {ECO:0000313|EMBL:CCX90855.1}; TaxID=1263000 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:110.;"
hypothetical protein
L1_007_000M1_scaffold_658_18
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20918..21259)
DNA (342bp) protein (114aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RZC5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL68037.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
L1_007_000M1_scaffold_658_19
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21263..22159)
DNA (897bp) protein (299aa)
Glycosyl hydrolase family 25 n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PR98_9FIRM
Glycosyl hydrolase family 25 {ECO:0000313|EMBL:EFB74800.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
lyzozyme M1
L1_007_000M1_scaffold_658_20
unknown

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comp(22152..22322)
DNA (171bp) protein (57aa)

This feature has no annotations

L1_007_000M1_scaffold_658_21
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(22448..22780)
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6Q5E1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC28254.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
L1_007_000M1_scaffold_658_22
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(22777..24009)
DNA (1233bp) protein (411aa)
Reverse transcriptase (RNA-dependent DNA polymerase) n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6PXE2_9FIRM
Reverse transcriptase (RNA-dependent DNA polymerase) {ECO:0000313|EMBL:CDC28255.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
Reverse transcriptase (RNA-dependent DNA polymerase).
L1_007_000M1_scaffold_658_23
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24479..26212)
DNA (1734bp) protein (578aa)
Conserved domain protein n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6QBU6_9FIRM
Conserved domain protein {ECO:0000313|EMBL:CDC28256.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
hypothetical protein
L1_007_000M1_scaffold_658_24
Bifidobacterium biavatii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26216..27040)
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Trypanosoma cruzi Dm28c RepID=V5CZ33_TRYCR
Cell surface protein {ECO:0000313|EMBL:KFI46093.1}; TaxID=1437608 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium biavatii DSM 23969.;"
putative phage tail fiber protein
L1_007_000M1_scaffold_658_25
[Clostridium] papyrosolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(27055..28749)
DNA (1695bp) protein (565aa)
Uncharacterized protein n=1 Tax=Clostridium papyrosolvens C7 RepID=U4QWK7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EPR07651.1}; TaxID=1330534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] papyrosolvens C7.;"
phage structural protein
L1_007_000M1_scaffold_658_26
Clostridium sp. ATCC 29733, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(28750..29511)
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Clostridium sp. (strain ATCC 29733 / VPI C48-50) RepID=U2DAY1_CLOS4
Uncharacterized protein {ECO:0000313|EMBL:ERI99974.1}; TaxID=1507 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. (strain ATCC 29733 / VPI C48-50).;"
hypothetical protein
L1_007_000M1_scaffold_658_27
Clostridium sp. ATCC 29733, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29518..29772)
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Clostridium sp. (strain ATCC 29733 / VPI C48-50) RepID=U2DAY1_CLOS4
Uncharacterized protein {ECO:0000313|EMBL:ERI99974.1}; TaxID=1507 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. (strain ATCC 29733 / VPI C48-50).;"
hypothetical protein
L1_007_000M1_scaffold_658_28
Clostridium sp. ATCC 29733, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29776..30639)
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Clostridium sp. (strain ATCC 29733 / VPI C48-50) RepID=U2DSV1_CLOS4
Uncharacterized protein {ECO:0000313|EMBL:ERI99975.1}; TaxID=1507 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. (strain ATCC 29733 / VPI C48-50).;"
phage tail protein
L1_007_000M1_scaffold_658_29
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30644..33307)
DNA (2664bp) protein (888aa)
hypothetical protein n=1 Tax=Oceanobacillus sp. Ndiop RepID=UPI00028841C3
TP901 family phage tail tape measure protein {ECO:0000313|EMBL:KGM99584.1}; TaxID=1443128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum C/D str. DC5.;"
phage tail tape measure protein, family
L1_007_000M1_scaffold_658_30
[Clostridium] papyrosolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(33367..33597)
DNA (231bp) protein (77aa)
HNH endonuclease n=1 Tax=Clostridium papyrosolvens C7 RepID=U4R272_9CLOT
HNH endonuclease {ECO:0000313|EMBL:EPR12325.1}; TaxID=1330534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] papyrosolvens C7.;"
Gp26
Displaying items 1-30 of 39 in total

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