name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
L1_007_000M1_scaffold_711_1
unknown
|
Not on your lists |
2..88
----------------- DNA (87bp) protein (29aa) |
This feature has no annotations |
|
L1_007_000M1_scaffold_711_2
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
342..2864
----------------- DNA (2523bp) protein (841aa) |
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PIN9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB77398.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
RND family transporter
|
|
L1_007_000M1_scaffold_711_3
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
2861..6037
----------------- DNA (3177bp) protein (1059aa) |
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PIP0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB77399.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
|
|
L1_007_000M1_scaffold_711_4
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(6228..6929)
----------------- DNA (702bp) protein (234aa) |
Peptidase C26 n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PRE2_9FIRM
Peptidase C26 {ECO:0000313|EMBL:EFB74746.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
peptidase C26
|
|
L1_007_000M1_scaffold_711_5
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(7029..7475)
----------------- DNA (447bp) protein (149aa) |
CBS domain protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLR4_9FIRM
CBS domain protein {ECO:0000313|EMBL:EFB76362.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
CBS domain.
|
|
L1_007_000M1_scaffold_711_6
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
7694..9826
----------------- DNA (2133bp) protein (711aa) |
DAK2 domain fusion protein YloV n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLR2_9FIRM
DAK2 domain fusion protein YloV {ECO:0000313|EMBL:EFB76360.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
DAK2 domain fusion protein YloV
|
|
L1_007_000M1_scaffold_711_7
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
9961..12003
----------------- DNA (2043bp) protein (681aa) |
ATP-dependent DNA helicase RecG {ECO:0000313|EMBL:EFB76359.1}; EC=3.6.1.- {ECO:0000313|EMBL:EFB76359.1};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
ATP-dependent DNA helicase RecG (EC:3.6.1.-)
ATP-dependent DNA helicase RecG n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLR1_9FIRM
|
|
L1_007_000M1_scaffold_711_8
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
12419..13705
----------------- DNA (1287bp) protein (429aa) |
Serine-type D-Ala-D-Ala carboxypeptidase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLR0_9FIRM
Serine-type D-Ala-D-Ala carboxypeptidase {ECO:0000313|EMBL:EFB76358.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
D-alanyl-D-alanine carboxypeptidase
|
|
L1_007_000M1_scaffold_711_9
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
13730..15175
----------------- DNA (1446bp) protein (482aa) |
Nicotinate phosphoribosyltransferase {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163}; EC=6.3.4.21 {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
nicotinate phosphoribosyltransferase (EC:2.4.2.11)
Nicotinate phosphoribosyltransferase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLQ9_9FIRM
|
|
L1_007_000M1_scaffold_711_10
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
15347..15742
----------------- DNA (396bp) protein (132aa) |
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLQ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB76356.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Predicted membrane protein
|
|
L1_007_000M1_scaffold_711_11
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
15811..15924
----------------- DNA (114bp) protein (38aa) |
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLQ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB76355.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
|
|
L1_007_000M1_scaffold_711_12
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
16115..16252
----------------- DNA (138bp) protein (46aa) |
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLQ6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB76354.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
|
|
L1_007_000M1_scaffold_711_13
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
16580..17599
----------------- DNA (1020bp) protein (340aa) |
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EFB76352.1}; EC=2.4.-.- {ECO:0000313|EMBL:EFB76352.1};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Glycosyltransferase, group 2 family protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLQ4_9FIRM
Glycosyltransferases involved in cell wall biogenesis
|
|
L1_007_000M1_scaffold_711_14
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
17609..18262
----------------- DNA (654bp) protein (218aa) |
Haloacid dehalogenase-like hydrolase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLQ3_9FIRM
Haloacid dehalogenase-like hydrolase {ECO:0000313|EMBL:EFB76351.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
gph; HAD-superfamily hydrolase, subfamily IA, variant 1
|
|
L1_007_000M1_scaffold_711_15
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(18264..19103)
----------------- DNA (840bp) protein (280aa) |
HTH-type transcriptional regulator HmrR n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLQ2_9FIRM
HTH-type transcriptional regulator HmrR {ECO:0000313|EMBL:EFB76350.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Predicted transcriptional regulators
|
|
L1_007_000M1_scaffold_711_16
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
19242..19634
----------------- DNA (393bp) protein (131aa) |
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLQ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB76349.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
|
|
L1_007_000M1_scaffold_711_17
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
19669..21024
----------------- DNA (1356bp) protein (452aa) |
tRNA nucleotidyltransferase/poly(A) polymerase family protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLQ0_9FIRM
tRNA nucleotidyltransferase/poly(A) polymerase family protein {ECO:0000313|EMBL:EFB76348.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
|
|
L1_007_000M1_scaffold_711_18
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
21021..21395
----------------- DNA (375bp) protein (125aa) |
Holo-[acyl-carrier-protein] synthase {ECO:0000256|HAMAP-Rule:MF_00101, ECO:0000256|SAAS:SAAS00237208}; Short=Holo-ACP synthase {ECO:0000256|HAMAP-Rule:MF_00101};; EC=2.7.8.7 {ECO:0000256|HAMAP-Rule:MF_00101};; 4'-phosphopantetheinyl transferase AcpS {ECO:0000256|HAMAP-Rule:MF_00101}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
phosphopantethiene--protein transferase domain (EC:2.7.8.7)
Holo-[acyl-carrier-protein] synthase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLP8_9FIRM
|
|
L1_007_000M1_scaffold_711_19
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
21426..22514
----------------- DNA (1089bp) protein (363aa) |
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLP7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB76345.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
|
|
L1_007_000M1_scaffold_711_20
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
22568..22945
----------------- DNA (378bp) protein (126aa) |
mRNA interferase {ECO:0000256|PIRNR:PIRNR033490}; EC=3.1.-.- {ECO:0000256|PIRNR:PIRNR033490};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
mRNA interferase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLP6_9FIRM
Growth inhibitor
|
|
L1_007_000M1_scaffold_711_21
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(22972..23667)
----------------- DNA (696bp) protein (232aa) |
LrgB-like protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJQ7_9FIRM
LrgB-like protein {ECO:0000313|EMBL:EFB77005.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Putative effector of murein hydrolase
|
|
L1_007_000M1_scaffold_711_22
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(23660..24019)
----------------- DNA (360bp) protein (120aa) |
LrgA family protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJQ8_9FIRM
LrgA family protein {ECO:0000313|EMBL:EFB77006.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
LrgA family protein
|
|
L1_007_000M1_scaffold_711_23
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
24211..24639
----------------- DNA (429bp) protein (143aa) |
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJQ9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB77007.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
|
|
L1_007_000M1_scaffold_711_24
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
24905..26488
----------------- DNA (1584bp) protein (528aa) |
ATP phosphoribosyltransferase {ECO:0000256|SAAS:SAAS00008790}; EC=2.4.2.17 {ECO:0000256|SAAS:SAAS00046302};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
ATP phosphoribosyltransferase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJR0_9FIRM
ATP phosphoribosyltransferase
|
|
L1_007_000M1_scaffold_711_25
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
26485..27768
----------------- DNA (1284bp) protein (428aa) |
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
histidinol dehydrogenase (EC:1.1.1.23)
Histidinol dehydrogenase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJR1_9FIRM
|
|
L1_007_000M1_scaffold_711_26
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
27768..28301
----------------- DNA (534bp) protein (178aa) |
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6HNB2_9FIRM
Transposase {ECO:0000313|EMBL:KJF28359.1}; TaxID=84022 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium aceticum.;"
transposase
|
|
L1_007_000M1_scaffold_711_27
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
28298..29362
----------------- DNA (1065bp) protein (355aa) |
Histidinol-phosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01023}; EC=2.6.1.9 {ECO:0000256|HAMAP-Rule:MF_01023};; Imidazole acetol-phosphate transaminase {ECO:0000256|HAMAP-Rule:MF_01023}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
histidinol-phosphate aminotransferase (EC:2.6.1.9)
Histidinol-phosphate aminotransferase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJR2_9FIRM
|
|
L1_007_000M1_scaffold_711_28
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
29385..30002
----------------- DNA (618bp) protein (206aa) |
Imidazole glycerol phosphate synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00278};; IGP synthase glutamine amidotransferase subunit {ECO:0000256|HAMAP-Rule:MF_00278}; IGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; ImGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
imidazole glycerol phosphate synthase subunit hisH (EC:2.4.2.-)
Imidazole glycerol phosphate synthase subunit HisH n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJR3_9FIRM
|
|
L1_007_000M1_scaffold_711_29
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
30022..30741
----------------- DNA (720bp) protein (240aa) |
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658}; EC=5.3.1.16 {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658};; Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase {ECO:0000256|HAMAP-Rule:MF_01014}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)me thylidenea mino] imidazole-4-carboxamide isomerase (EC:5.3.1.16)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJR4_9FIRM
|
|
L1_007_000M1_scaffold_711_30
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
30746..31504
----------------- DNA (759bp) protein (253aa) |
Imidazole glycerol phosphate synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; EC=4.1.3.- {ECO:0000256|HAMAP-Rule:MF_01013};; IGP synthase cyclase subunit {ECO:0000256|HAMAP-Rule:MF_01013}; IGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; ImGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hisF; imidazole glycerol phosphate synthase subunit HisF (EC:4.1.3.-)
Imidazole glycerol phosphate synthase subunit HisF n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJR5_9FIRM
|