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L1_007_000M1_scaffold_788

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_788_1
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..420)
DNA (420bp) protein (140aa)
Response regulator receiver domain protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PIC2_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:EFB77590.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
two component transcriptional regulator
L1_007_000M1_scaffold_788_2
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

1056..1967
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6MRZ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB88617.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
hypothetical protein
L1_007_000M1_scaffold_788_3
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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2058..2273
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PIB0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB77578.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
L1_007_000M1_scaffold_788_4
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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comp(2343..3122)
DNA (780bp) protein (260aa)
Metal cation transporter ZIP family n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IU43_9FIRM
Metal cation transporter ZIP family {ECO:0000313|EMBL:CCY40256.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
Predicted divalent heavy-metal cations transporter
L1_007_000M1_scaffold_788_5

Not on your lists

comp(3168..3944)
DNA (777bp) protein (259aa)
Uncharacterized protein (Fragment) n=1 Tax=human gut metagenome RepID=K1SGH5_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC56688.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L1_007_000M1_scaffold_788_6
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3931..4581)
DNA (651bp) protein (217aa)
methyltransferase n=1 Tax=Ruminococcus sp. JC304 RepID=UPI00031364F7
Methyltransferase domain protein {ECO:0000313|EMBL:CDC39014.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
Methylase involved in ubiquinone/menaquinone biosynthesis
L1_007_000M1_scaffold_788_7
Anaerotruncus sp. CAG:390, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4584..5147)
DNA (564bp) protein (188aa)
Methyltransferase domain protein n=1 Tax=Anaerotruncus sp. CAG:390 RepID=R7EM70_9FIRM
Methyltransferase domain protein {ECO:0000313|EMBL:CDE03551.1}; TaxID=1262703 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:390.;"
Methylase involved in ubiquinone/menaquinone biosynthesis
L1_007_000M1_scaffold_788_8
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

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comp(5493..6887)
DNA (1395bp) protein (465aa)
Putative permease n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5GWM6_9FIRM
Putative permease {ECO:0000313|EMBL:CCY21790.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
uracil-xanthine permease
L1_007_000M1_scaffold_788_9
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7050..8639)
DNA (1590bp) protein (530aa)
Alpha-galactosidase n=2 Tax=Faecalibacterium prausnitzii RepID=A8SB07_9FIRM
Alpha-galactosidase {ECO:0000313|EMBL:EDP21706.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
Alpha-galactosidase
L1_007_000M1_scaffold_788_10
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8632..10017)
DNA (1386bp) protein (462aa)
Glycoside/pentoside/hexuronide transporter n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H7H1_9FIRM
Glycoside/pentoside/hexuronide transporter {ECO:0000313|EMBL:EEU96114.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
sugar transporter
L1_007_000M1_scaffold_788_11
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10008..12380)
DNA (2373bp) protein (791aa)
Beta-galactosidase/beta-glucuronidase (EC:3.2.1.23)
Putative beta-galactosidase n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SB05_9FIRM
Putative beta-galactosidase {ECO:0000313|EMBL:EDP21704.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
L1_007_000M1_scaffold_788_12
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12377..12946)
DNA (570bp) protein (190aa)
Transcriptional regulator, TetR family n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H7G9_9FIRM
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EEU96112.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Bacterial regulatory proteins, tetR family.
L1_007_000M1_scaffold_788_13
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13149..14555)
DNA (1407bp) protein (469aa)
MATE efflux family protein n=1 Tax=Coprococcus comes CAG:19 RepID=R6LE15_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:CDB85748.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
multidrug resistance protein, MATE family
L1_007_000M1_scaffold_788_14
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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15552..16328
DNA (777bp) protein (259aa)
Cof-like hydrolase n=2 Tax=Ruminococcus lactaris RepID=B5CMH6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD26393.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
cof family hydrolase
L1_007_000M1_scaffold_788_15
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16347..17414)
DNA (1068bp) protein (356aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7HA08_9FIRM
histidine kinase
L1_007_000M1_scaffold_788_16
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17416..18090)
DNA (675bp) protein (225aa)
Response regulator receiver domain protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7HA09_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:EEU95185.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
heme response regulator HssR
L1_007_000M1_scaffold_788_17
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18358..19374
DNA (1017bp) protein (339aa)
NAD dependent epimerase/dehydratase family protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7HA11_9FIRM
NAD dependent epimerase/dehydratase family protein {ECO:0000313|EMBL:EEU95187.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
NAD-dependent epimerase/dehydratase
L1_007_000M1_scaffold_788_18
unknown

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19371..19463
DNA (93bp) protein (31aa)

This feature has no annotations

L1_007_000M1_scaffold_788_19
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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19489..20313
DNA (825bp) protein (275aa)
Oxidoreductase, short chain dehydrogenase/reductase family protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7HA12_9FIRM
Oxidoreductase, short chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:EEU95188.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
short-chain dehydrogenase/reductase SDR
L1_007_000M1_scaffold_788_20
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20394..21509)
DNA (1116bp) protein (372aa)
UDP-galactopyranose mutase {ECO:0000313|EMBL:EDP20144.1}; EC=5.4.99.9 {ECO:0000313|EMBL:EDP20144.1};; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
UDP-galactopyranose mutase (EC:5.4.99.9)
UDP-galactopyranose mutase n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SG29_9FIRM
L1_007_000M1_scaffold_788_21
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21606..22853)
DNA (1248bp) protein (416aa)
nucleotide sugar dehydrogenase (EC:1.1.1.22)
Nucleotide sugar dehydrogenase n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7L3M3_9FIRM
Nucleotide sugar dehydrogenase {ECO:0000313|EMBL:CDE81782.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
L1_007_000M1_scaffold_788_22
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(22986..24428)
DNA (1443bp) protein (481aa)
hypothetical protein n=1 Tax=Clostridiales bacterium NK3B98 RepID=UPI0003B376B7
Uncharacterized protein {ECO:0000313|EMBL:EDN01860.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
hypothetical protein
L1_007_000M1_scaffold_788_23
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(24403..25749)
DNA (1347bp) protein (449aa)
MBOAT family protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NPT6_9FIRM
MBOAT family protein {ECO:0000313|EMBL:EDN01861.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
Predicted membrane protein involved in D-alanine export
L1_007_000M1_scaffold_788_24
unknown

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comp(25746..25952)
DNA (207bp) protein (69aa)

This feature has no annotations

L1_007_000M1_scaffold_788_25
Blautia sp. CAG:237, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(25949..27715)
DNA (1767bp) protein (589aa)
hypothetical protein n=1 Tax=Clostridiales bacterium NK3B98 RepID=UPI0003B586DF
Uncharacterized protein {ECO:0000313|EMBL:CDB76717.1}; TaxID=1262755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:237.;"
Listeria-Bacteroides repeat domain (List_Bact_rpt).
L1_007_000M1_scaffold_788_26
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27836..28261)
DNA (426bp) protein (142aa)
hypothetical protein n=1 Tax=Butyrivibrio sp. AE2015 RepID=UPI0003B4372B
Uncharacterized protein {ECO:0000313|EMBL:ENY92052.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
hypothetical protein
L1_007_000M1_scaffold_788_27
Clostridium sp. ASF502, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28275..31352)
DNA (3078bp) protein (1026aa)
Beta-glucosidase-related glycosidases (EC:3.2.1.21)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF502 RepID=N2A6Y1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMZ23961.1}; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;"
L1_007_000M1_scaffold_788_28
Blautia sp. CAG:237, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31489..32949)
DNA (1461bp) protein (487aa)
Transporter major facilitator family protein n=1 Tax=Blautia sp. CAG:237 RepID=R6L3G2_9FIRM
Transporter major facilitator family protein {ECO:0000313|EMBL:CDB76716.1}; TaxID=1262755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:237.;"
Na+/melibiose symporter and related transporters
L1_007_000M1_scaffold_788_29
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(33000..35549)
DNA (2550bp) protein (850aa)
Alpha-L-rhamnosidase N-terminal domain protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NPU3_9FIRM
Alpha-L-rhamnosidase N-terminal domain protein {ECO:0000313|EMBL:EDN01868.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
alpha-L-rhamnosidase
L1_007_000M1_scaffold_788_30
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(35815..37344)
DNA (1530bp) protein (510aa)
SPFH/Band 7/PHB domain protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FQM0_9FIRM
SPFH/Band 7/PHB domain protein {ECO:0000313|EMBL:EEG95124.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
hypothetical protein
Displaying items 1-30 of 43 in total

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