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L1_007_000M1_scaffold_6973

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_6973_1
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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413..1405
DNA (993bp) protein (331aa)
4-phosphoerythronate dehydrogenase {ECO:0000313|EMBL:EFB75087.1}; EC=1.1.1.290 {ECO:0000313|EMBL:EFB75087.1};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Lactate dehydrogenase and related dehydrogenases (EC:1.1.1.28)
4-phosphoerythronate dehydrogenase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PQE2_9FIRM
L1_007_000M1_scaffold_6973_2
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1701..2798)
DNA (1098bp) protein (366aa)
Mannonate dehydratase {ECO:0000256|HAMAP-Rule:MF_00106, ECO:0000256|SAAS:SAAS00189414}; EC=4.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00106, ECO:0000256|SAAS:SAAS00189414};; D-mannonate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00106}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
D-mannonate dehydratase (EC:4.2.1.8)
Mannonate dehydratase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PSP7_9FIRM
L1_007_000M1_scaffold_6973_3
unknown

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2913..3569
DNA (657bp) protein (219aa)

This feature has no annotations

L1_007_000M1_scaffold_6973_4
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3376..4659)
DNA (1284bp) protein (428aa)
Mannitol dehydrogenase domain protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PSP8_9FIRM
Mannitol dehydrogenase domain protein {ECO:0000313|EMBL:EFB74281.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
mannitol dehydrogenase domain-containing protein
L1_007_000M1_scaffold_6973_5
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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5012..5731
DNA (720bp) protein (240aa)
Transcriptional regulator, AraC family n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PSQ0_9FIRM
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EFB74283.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
helix-turn-helix domain-containing protein
L1_007_000M1_scaffold_6973_6
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6493..8208)
DNA (1716bp) protein (572aa)
Nitrogen regulatory protein P-II n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PQI1_9FIRM
Nitrogen regulatory protein P-II {ECO:0000313|EMBL:EFB75039.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
ammonium transporter
L1_007_000M1_scaffold_6973_7
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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8737..9141
DNA (405bp) protein (135aa)
Sodium pump decarboxylase, gamma subunit (Fragment) n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PSP4_9FIRM
Sodium pump decarboxylase, gamma subunit {ECO:0000313|EMBL:EFB74291.1}; Flags: Fragment;; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Oxaloacetate decarboxylase, gamma chain.
L1_007_000M1_scaffold_6973_8

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9154..9600
DNA (447bp) protein (149aa)
Oxaloacetate decarboxylase, beta subunit {ECO:0000313|EMBL:EKC79995.1}; EC=4.1.1.3 {ECO:0000313|EMBL:EKC79995.1};; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
glutaconyl-CoA decarboxylase beta subunit (EC:4.1.1.70 4.1.1.3)
Oxaloacetate decarboxylase, beta subunit (Fragment) n=1 Tax=human gut metagenome RepID=K1UPA3_9ZZZZ
Displaying 8 items

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