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L1_007_000M1_scaffold_2612

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_2612_1
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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438..1961
DNA (1524bp) protein (508aa)
Putative membrane protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GSF8_9FIRM
Putative membrane protein {ECO:0000313|EMBL:CDB27370.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
hypothetical protein
L1_007_000M1_scaffold_2612_2
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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1963..2652
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6H1M1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB27371.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
hypothetical protein
L1_007_000M1_scaffold_2612_3
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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2752..3726
DNA (975bp) protein (325aa)
Choloylglycine hydrolase {ECO:0000313|EMBL:EDM88905.1}; EC=3.5.1.24 {ECO:0000313|EMBL:EDM88905.1};; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
Penicillin V acylase and related amidases (EC:3.5.1.24)
Choloylglycine hydrolase n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZM11_9FIRM
L1_007_000M1_scaffold_2612_4
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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3846..4094
DNA (249bp) protein (83aa)
Preprotein translocase, SecG subunit n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLE8_9FIRM
Preprotein translocase, SecG subunit {ECO:0000313|EMBL:EFB76806.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
preprotein translocase subunit SecG
L1_007_000M1_scaffold_2612_5
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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4238..6373
DNA (2136bp) protein (712aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
RNAse R (EC:3.1.-.-)
Ribonuclease R n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLE7_9FIRM
L1_007_000M1_scaffold_2612_6
Eubacterium plexicaudatum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6434..7789)
DNA (1356bp) protein (452aa)
MATE efflux family protein n=1 Tax=Eubacterium plexicaudatum ASF492 RepID=N2A609_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EMZ21500.1}; TaxID=1235802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium plexicaudatum ASF492.;"
putative efflux protein, MATE family
L1_007_000M1_scaffold_2612_7
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8048..9265)
DNA (1218bp) protein (406aa)
Alcohol dehydrogenase, iron-dependent {ECO:0000313|EMBL:EFB77036.1}; EC=1.1.1.1 {ECO:0000313|EMBL:EFB77036.1};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Alcohol dehydrogenase, iron-dependent n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJT8_9FIRM
Alcohol dehydrogenase, class IV
L1_007_000M1_scaffold_2612_8
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9451..11250
DNA (1800bp) protein (600aa)
Penicillin-binding protein, transpeptidase domain protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SD49_9FIRM
Penicillin-binding protein, transpeptidase domain protein {ECO:0000313|EMBL:EDP20796.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
Cell division protein FtsI/penicillin-binding protein 2
L1_007_000M1_scaffold_2612_9
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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11463..11981
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PK47_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB77145.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
marR2; regulatory protein MarR
L1_007_000M1_scaffold_2612_10
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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11975..12949
DNA (975bp) protein (325aa)
ABC transporter, ATP-binding protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PK48_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFB77146.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
multidrug ABC transporter ATPase
L1_007_000M1_scaffold_2612_11
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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12939..13715
DNA (777bp) protein (259aa)
ABC transporter, ATP-binding protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PK48_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFB77146.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
ABC-type multidrug transport system, ATPase and permease components
Displaying 11 items

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