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L1_007_000M1_scaffold_356_25

Organism: dasL1_007_000M1_maxbin2_maxbin_048_fasta_fa

near complete RP 44 / 55 BSCG 46 / 51 MC: 1 ASCG 12 / 38
Location: 27867..28760

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.5
  • Coverage: 297.0
  • Bit_score: 503
  • Evalue 1.50e-139
tRNA pseudouridine 55 synthase (EC:5.4.99.12) similarity KEGG
DB: KEGG
  • Identity: 68.6
  • Coverage: 293.0
  • Bit_score: 392
  • Evalue 9.60e-107
tRNA pseudouridine synthase B n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLN1_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 81.5
  • Coverage: 297.0
  • Bit_score: 503
  • Evalue 1.00e-139

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Taxonomy

Subdoligranulum variabile → Subdoligranulum → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 894
ATGCAAACGCCAAACGGCATTCTGCCCGTGGATAAGCCCGCCGGCTGGACCAGCTTTGATGTGCTGGCCAAGCTGCGCGGCGCGCTGGGCACACGCAAGCTGGGACACTCGGGCACACTGGACCCTATGGCCACCGGTGTGCTCGCGGTGTTTATCGGCAAGGCGACTGCGGCCGCCGACCGCCAGCTTGACCATGATAAAACCTACGAAGCAACGCTGCGTCTGGGCCTGCGCACCGATACCGGCGATGTGACCGGCGAAACGCTGGAAACAGCCCCCGTCACGGTCGGCGCGCAGGAGCTGTGCGCCGTGCTGCCGCAGTTCCGTGGTGACCGGATGCAGCTGCCGCCGATGTACAGCGCGGTCAAGATCAACGGCCAGCCGCTGTACAAGGCTGCCCGCAAGGGCCAGACTGTGGAGCGCACGCCCCGCCCCATCACGATTTACGACATTGAATATCTCGGCAGCCCCGCACAGGATGAGTACACGATCCGGGTAGCCTGCTCCAAGGGCACCTACATCCGTGTGCTGGCCGAGGAGATCGGCGCCGCCCTCGGCGTACCTGCGACCCTGTCGGCGCTGCGCCGCACACAGGCGGGTGTGTTCAGTCTGGCCCAGTGCCACACGCTGCCGGAAATTTTAGCCGCCGCCGAGAGCGGGGAACTCGAAACCAACGGCTGGGTGCTGCCCATCGAGACGGTTTTCACCCCGCTGCCCGCGCTGCATGTCAACGAGGGCGTGAAGGCACACCTGCTCAACGGCTGCCCTACCAGCCACTATAAGGCTGCTGACGGCCGTTACCGCGTCTATGAGGAAAGCGGCGCGTTTCTGGGTCTGGCCGGGGTCGAGGACGGTGTGCTGAAGGTCGAAAAACTATTTTGCGAAAGGGGCTGA
PROTEIN sequence
Length: 298
MQTPNGILPVDKPAGWTSFDVLAKLRGALGTRKLGHSGTLDPMATGVLAVFIGKATAAADRQLDHDKTYEATLRLGLRTDTGDVTGETLETAPVTVGAQELCAVLPQFRGDRMQLPPMYSAVKINGQPLYKAARKGQTVERTPRPITIYDIEYLGSPAQDEYTIRVACSKGTYIRVLAEEIGAALGVPATLSALRRTQAGVFSLAQCHTLPEILAAAESGELETNGWVLPIETVFTPLPALHVNEGVKAHLLNGCPTSHYKAADGRYRVYEESGAFLGLAGVEDGVLKVEKLFCERG*