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L1_007_000M1_scaffold_6259_1

Organism: dasL1_007_000M1_maxbin2_maxbin_048_fasta_fa

near complete RP 44 / 55 BSCG 46 / 51 MC: 1 ASCG 12 / 38
Location: comp(465..1148)

Top 3 Functional Annotations

Value Algorithm Source
Sigma-70 region 2 n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PK58_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 87.3
  • Coverage: 229.0
  • Bit_score: 392
  • Evalue 2.00e-106
Sigma-70 region 2 {ECO:0000313|EMBL:EFB77156.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.3
  • Coverage: 229.0
  • Bit_score: 392
  • Evalue 2.80e-106
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 68.1
  • Coverage: 216.0
  • Bit_score: 296
  • Evalue 4.20e-78

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Taxonomy

Subdoligranulum variabile → Subdoligranulum → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 684
ATGCCTGCCGATATCCGACAGCTGCCGCGCGAAGAATTTATCGAAAAGAATCTGGGACTCGTACACGCCTGTGCCGGAAGGTTCAAGGGGCGGGGCATCGAATATGAGGAACTGTACGCTGCGGGCTGTCTGGGGCTGGTTAAGGCCTGCGATGGCTTTGACACCGGCCGCGGCGTCTGCTTTTCCACCTACGCCGTACCGGTCATTCTGGGCGAGATCAAAAAGCTGTTCCGGGACGGCGGCACGGTGAAGGTCAGCCGGTCGCTAAAGGAGCTGAGCCTGAAAATCAACGCCGAGCGCGAGCGCTGCCTGAAGCGCACCGGGCAGGAGCCGGGCGTCACCGAACTGGCAGAAACCCTGGGCACGACCCCGGAGCAGATCGCCCTCGCCATCCGGGCCTCGCTGCCGGCCCTGAGCCTGACGCCGACAGATGATGAGGATGGCCTGAAGGAATTCGATGTACCTATCGACTCCCCGGAGGAGGTACTTTCCGACCGGATCGGCCTTGCGGAGGTGATGGACAGGCTCAGCGATGGTGATCGCCAGCTTATCCGGCTGCGCTTCTTTGCAGGCCGAACCCAAAGCGAAACGGCCCGCGTTCTAGGCACAACGCAGGTCCAAATATCCCGCCGTGAGCGCCGCATCCTGAAATGGATGCGCGAACAACTGCTGGAAGCACTGTGA
PROTEIN sequence
Length: 228
MPADIRQLPREEFIEKNLGLVHACAGRFKGRGIEYEELYAAGCLGLVKACDGFDTGRGVCFSTYAVPVILGEIKKLFRDGGTVKVSRSLKELSLKINAERERCLKRTGQEPGVTELAETLGTTPEQIALAIRASLPALSLTPTDDEDGLKEFDVPIDSPEEVLSDRIGLAEVMDRLSDGDRQLIRLRFFAGRTQSETARVLGTTQVQISRRERRILKWMREQLLEAL*