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L1_007_000M1_scaffold_4071

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_4071_1
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(675..1574)
DNA (900bp) protein (300aa)
EDD domain protein DegV family n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GBF1_9FIRM
EDD domain protein DegV family {ECO:0000313|EMBL:CCY13219.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
EDD domain protein, DegV family
L1_007_000M1_scaffold_4071_2
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1991..2209)
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:146 RepID=R5G7T5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY13218.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
hypothetical protein
L1_007_000M1_scaffold_4071_3
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2215..2436)
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GK79_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY13217.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
hypothetical protein
L1_007_000M1_scaffold_4071_4
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2440..2679)
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GKX3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY13216.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
hypothetical protein
L1_007_000M1_scaffold_4071_5
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2676..3158)
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:146 RepID=R5G7D3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY13215.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
hypothetical protein
L1_007_000M1_scaffold_4071_6
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3187..3597)
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GBE6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY13214.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
hypothetical protein
L1_007_000M1_scaffold_4071_7
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4447..5091)
DNA (645bp) protein (215aa)
6-O-methylguanine DNA methyltransferase DNA binding domain protein n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GLC7_9FIRM
6-O-methylguanine DNA methyltransferase DNA binding domain protein {ECO:0000313|EMBL:CCY13381.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
O-6-methylguanine DNA methyltransferase
L1_007_000M1_scaffold_4071_8
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5416..6402
DNA (987bp) protein (329aa)
diaminopimelate dehydrogenase (EC:1.4.1.16)
Diaminopimelate dehydrogenase n=1 Tax=Eubacterium sp. CAG:146 RepID=R5G7T6_9FIRM
Diaminopimelate dehydrogenase {ECO:0000313|EMBL:CCY13375.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
L1_007_000M1_scaffold_4071_9
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6525..8012
DNA (1488bp) protein (496aa)
ATP-dependent Lon protease, bacterial type (EC:3.4.21.53)
ATPase AAA family n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GBU4_9FIRM
ATPase AAA family {ECO:0000313|EMBL:CCY13374.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
L1_007_000M1_scaffold_4071_10
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8486..10855)
DNA (2370bp) protein (790aa)
Diguanylate cyclase (GGDEF) domain n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GKP9_9FIRM
Diguanylate cyclase (GGDEF) domain {ECO:0000313|EMBL:CCY13372.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
diguanylate cyclase (GGDEF) domain
L1_007_000M1_scaffold_4071_11
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10988..11914)
DNA (927bp) protein (309aa)
Prepilin-type N-terminal cleavage/methylation domain n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GLB7_9FIRM
Prepilin-type N-terminal cleavage/methylation domain {ECO:0000313|EMBL:CCY13371.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
prepilin-type N-terminal cleavage/methylation domain
L1_007_000M1_scaffold_4071_12
unknown

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comp(11935..12105)
DNA (171bp) protein (57aa)

This feature has no annotations

L1_007_000M1_scaffold_4071_13
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12305..12685)
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:146 RepID=R5G7T2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY13370.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
L1_007_000M1_scaffold_4071_14
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12690..13874)
DNA (1185bp) protein (395aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GBT8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY13369.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
L1_007_000M1_scaffold_4071_15
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13885..14436)
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:146 RepID=R5G879_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY13368.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
L1_007_000M1_scaffold_4071_16
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14547..14711)
DNA (165bp) protein (55aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GKP3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY13367.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
L1_007_000M1_scaffold_4071_17
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14807..15154)
DNA (348bp) protein (116aa)
Sugar kinases, ribokinase family (EC:2.7.1.4)
Kinase PfkB family n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GLB3_9FIRM
Kinase PfkB family {ECO:0000313|EMBL:CCY13366.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
L1_007_000M1_scaffold_4071_18
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15773..16024
DNA (252bp) protein (84aa)
Putative ribose operon repressor n=1 Tax=Eubacterium sp. CAG:146 RepID=R5G7S7_9FIRM
Putative ribose operon repressor {ECO:0000313|EMBL:CCY13365.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
transcriptional regulator, LacI family
L1_007_000M1_scaffold_4071_19
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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16041..16520
DNA (480bp) protein (160aa)
Response regulator receiver domain protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GE14_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:EEU99913.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
Displaying 19 items

View Taxonomy