ggKbase home page

L1_007_000M1_scaffold_4221

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_4221_1
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20..1387)
DNA (1368bp) protein (456aa)
Transporter n=3 Tax=Lachnospiraceae RepID=E5VPB5_9FIRM
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
sodium:neurotransmitter symporter family protein
L1_007_000M1_scaffold_4221_2
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1644..2336
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Anaerostipes hadrus DSM 3319 RepID=L1QD14_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EKY25590.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
hypothetical protein
L1_007_000M1_scaffold_4221_3
Clostridium sp. SS2/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2401..4074
DNA (1674bp) protein (558aa)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612};; Phosphoglucose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Phosphohexose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; TaxID=411484 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. SS2/1.;"
glucose-6-phosphate isomerase (EC:5.3.1.9)
Glucose-6-phosphate isomerase n=1 Tax=Anaerostipes hadrus DSM 3319 RepID=L1QCA2_9FIRM
L1_007_000M1_scaffold_4221_4
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4088..5677
DNA (1590bp) protein (530aa)
Fibronectin type III domain protein n=1 Tax=Anaerostipes hadrus DSM 3319 RepID=L1QDB9_9FIRM
Fibronectin type III domain protein {ECO:0000313|EMBL:EKY25592.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
Fibronectin type III domain.
L1_007_000M1_scaffold_4221_5
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5825..6088)
DNA (264bp) protein (88aa)
PTS HPr component phosphorylation site n=3 Tax=Lachnospiraceae RepID=E5VPP5_9FIRM
Phosphotransferase System HPr (HPr) Family
Phosphocarrier, HPr family {ECO:0000313|EMBL:EKY25593.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
L1_007_000M1_scaffold_4221_6
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6085..7011)
DNA (927bp) protein (309aa)
Putative sporulation transcription regulator WhiA n=3 Tax=Lachnospiraceae RepID=E5VPP6_9FIRM
Putative sporulation transcription regulator WhiA {ECO:0000256|HAMAP-Rule:MF_01420, ECO:0000256|SAAS:SAAS00005305}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
hypothetical protein
L1_007_000M1_scaffold_4221_7
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7015..7869)
DNA (855bp) protein (285aa)
UPF0042 nucleotide-binding protein HMPREF0996_03011 n=3 Tax=Lachnospiraceae RepID=E5VPP7_9FIRM
Nucleotide-binding protein HMPREF0996_03011 {ECO:0000256|HAMAP-Rule:MF_00636}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
Predicted P-loop-containing kinase
L1_007_000M1_scaffold_4221_8
Clostridium sp. SS2/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7885..8793)
DNA (909bp) protein (303aa)
UDP-N-acetylmuramate dehydrogenase (EC:1.1.1.158)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-acetylmuramate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00037}; TaxID=411484 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. SS2/1.;"
UDP-N-acetylenolpyruvoylglucosamine reductase n=4 Tax=Clostridiales RepID=D4MUA0_9FIRM
L1_007_000M1_scaffold_4221_9
unknown

Not on your lists

comp(8863..9798)
DNA (936bp) protein (312aa)
glucokinase (EC:2.7.1.2)
Glucokinase {ECO:0000313|EMBL:CBL38965.1}; EC=2.7.1.2 {ECO:0000313|EMBL:CBL38965.1};; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
Glucokinase n=2 Tax=Clostridiales RepID=D4MU99_9FIRM
L1_007_000M1_scaffold_4221_10
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9804..10739)
DNA (936bp) protein (312aa)
Hpr(Ser) kinase/phosphatase (EC:2.7.1.- 2.7.11.- 2.7.4.-)
HPr kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058411}; Short=HPrK/P {ECO:0000256|HAMAP-Rule:MF_01249};; EC=2.7.11.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058427};; EC=2.7.4.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058435};; HPr(Ser) kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
HPr kinase/phosphorylase n=3 Tax=Lachnospiraceae RepID=E5VPQ0_9FIRM
L1_007_000M1_scaffold_4221_11
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10801..12108)
DNA (1308bp) protein (436aa)
UvrABC system protein C n=1 Tax=Anaerostipes hadrus DSM 3319 RepID=L1QCA0_9FIRM
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
excinuclease ABC, C subunit
Displaying 11 items

View Taxonomy